DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ALiX and BRO1

DIOPT Version :9

Sequence 1:NP_651582.1 Gene:ALiX / 43330 FlyBaseID:FBgn0086346 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_015241.1 Gene:BRO1 / 856021 SGDID:S000006005 Length:844 Species:Saccharomyces cerevisiae


Alignment Length:913 Identity:199/913 - (21%)
Similarity:357/913 - (39%) Gaps:256/913 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LKKPSEVDVIKPLNNLIQSTYNGASE-----EEKGKYGEAVNEFSKQRNTAIWKFFE-------- 60
            ||...::|..|.|::.::.:| |:|:     :||     |.:|....||.|..:...        
Yeast    10 LKDTEKLDWKKGLSSYLKKSY-GSSQWRTFYDEK-----ATSELDHLRNNANGELAPSSLSEQNL 68

  Fly    61 KYEASLEIVYAYYDQICALETKISVSELQIPFKWKDA----FDKGSIFGGKISLTHTSLLYEKVC 121
            ||.:.||.:|      ..|.:|  .|.|::.|.|.||    ..||      :..|..:|.:||.|
Yeast    69 KYYSFLEHLY------FRLGSK--GSRLKMDFTWYDAEYSSAQKG------LKYTQHTLAFEKSC 119

  Fly   122 VLFNIAALQSNIAANQSLDSDDGLKLTIKLLQQSAGIFQYLKGATPAAVPSE-----PTPDLSQD 181
            .|||||.:.:.| |.::::.|  .|.:|..|.::...|:||         ||     |:.||..:
Yeast   120 TLFNIAVIFTQI-ARENINED--YKNSIANLTKAFSCFEYL---------SENFLNSPSVDLQSE 172

  Fly   182 TLTVLQALMVAQAQEVFILKAIKDNLKDQ---IIAKL---CCQAEESYADVLRAMQKESVRSLWE 240
            ....|..:..|:|||:|:||.:.|.:..:   :|:||   .|...:...|.::.:. :.|....|
Yeast   173 NTRFLANICHAEAQELFVLKLLNDQISSKQYTLISKLSRATCNLFQKCHDFMKEID-DDVAIYGE 236

  Fly   241 KEWIPTIAGKQAGFHALTQLYQSLVCRAAKKIGEEIARLRNAIDLFKAAQTRSG--NETYLDEY- 302
            .:|..|:..|...:.:|:..|..|......::||.||.|.     |...|..|.  .:|:|.|: 
Yeast   237 PKWKTTVTCKLHFYKSLSAYYHGLHLEEENRVGEAIAFLD-----FSMQQLISSLPFKTWLVEFI 296

  Fly   303 -FSRAKRNL----TESTKDNEFIYNEIIP---------ELSTLTSPGKAQLAKPLPIAVPLAENF 353
             |...|..|    .|..|||:|||:|.:|         .|..:.||...::.:  |....:|...
Yeast   297 DFDGFKETLEKKQKELIKDNDFIYHESVPAVVQVDSIKALDAIKSPTWEKILE--PYMQDVANKC 359

  Fly   354 KDIFSSLVPVELHRALTASDMRRNEIVNVEIMKLREATQTLNAVLASL----NLPAAV-----ET 409
            ..::..::|::::...:.....:..::..::    |.|:|.|...:|.    |||..:     :.
Yeast   360 DSLYRGIIPLDVYEKESIYSEEKATLLRKQV----EETETANLEYSSFIEFTNLPRLLSDLEKQF 420

  Fly   410 ADGNSGLPPSLKEKANEVRQKGGIENVQTMLK--------DLPELLN----RNREILDETERLLD 462
            :|||  :..:...:...:|     :.:||..|        |:.|.:|    :.::||:....|.:
Yeast   421 SDGN--IFSNTDTQGQLMR-----DQIQTWCKFIQTNEFRDIEEQMNKIVFKRKQILEILSALPN 478

  Fly   463 EERDSDNQLRAQFKDRWTRISSDKLTEMFRTNAKKYREVITNAIEADKVVRQKFEANQKGIQLLS 527
            :::::..:|::...     .:|:...::|.  ..|...|..|.:..:..:.:||           
Yeast   479 DQKENVTKLKSSLV-----AASNSDEKLFA--CVKPHIVEINLLNDNGKIWKKF----------- 525

  Fly   528 LPPDQIQQSLPSASGSVDPNCSSVQRLKKLM-------DDVETIKAEREAIESELKGATFN---- 581
               |:..::.|.....:|.:.:...::.:|:       :|:.|:|.||....|||:....|    
Yeast   526 ---DEFNRNTPPQPSLLDIDDTKNDKILELLKQVKGHAEDLRTLKEERSRNLSELRDEINNDDIT 587

  Fly   582 -------------MKDEFLIALQKDGAIDEPALSLARIGQVLNPLQQQVRESVERQQSLVSEIQ- 632
                         :||.|.:.|:|                 ..||..::..::.:|.|::.:|: 
Yeast   588 KLLIINKGKSDVELKDLFEVELEK-----------------FEPLSTRIEATIYKQSSMIDDIKA 635

  Fly   633 ---------------SAHGAFVSETGSCGSSRDTLYQELATAFDSYIELSGNLQEGTKFYNDLTQ 682
                           |....|:.:       |...:.:|..|..|:...:.:|.:|.:||:.|..
Yeast   636 KLDEIFHLSNFKDKSSGEEKFLED-------RKNFFDKLQEAVKSFSIFASDLPKGIEFYDSLFN 693

  Fly   683 LLVVFQNKISDFVFARKTEKEELLKDLTTESSRQACP----------ATPALPSHYA-----STS 732
            :......::.   .|::||      |.|..|.....|          ..|.||...|     |..
Yeast   694 MSRDLAERVR---VAKQTE------DSTANSPAPPLPPLDSKASVVGGPPLLPQKSAAFQSLSRQ 749

  Fly   733 G-------------SGSDIPPGSAPSVPPAASTANIPYPAQVQGMPIPYGAQPGVPYPAYVPAPM 784
            |             :|||:|.|  |.:||....|:            ||.|.|.:..|   |.|.
Yeast   750 GLNLGDQFQNLKISAGSDLPQG--PGIPPRTYEAS------------PYAATPTMAAP---PVPP 797

  Fly   785 PQS 787
            .||
Yeast   798 KQS 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ALiXNP_651582.1 BRO1_Alix 2..347 CDD:185763 103/382 (27%)
V_Alix 362..698 CDD:185748 64/396 (16%)
ALIX_LYPXL_bnd 415..701 CDD:290660 53/337 (16%)
MFMR 733..822 CDD:285072 19/68 (28%)
BRO1NP_015241.1 BRO1_ScBro1_like 5..347 CDD:185765 102/374 (27%)
V_ScBro1_like 368..702 CDD:185750 64/389 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346515
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2220
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.704428 Normalized mean entropy S2147
OMA 1 1.010 - - QHG53532
OrthoFinder 1 1.000 - - FOG0003348
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23030
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R147
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.830

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