DRSC/TRiP Functional Genomics Resources

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Protein Alignment ALiX and AT1G13310

DIOPT Version :9

Sequence 1:NP_651582.1 Gene:ALiX / 43330 FlyBaseID:FBgn0086346 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_563927.3 Gene:AT1G13310 / 837891 AraportID:AT1G13310 Length:374 Species:Arabidopsis thaliana


Alignment Length:400 Identity:79/400 - (19%)
Similarity:153/400 - (38%) Gaps:98/400 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKFLGVPLKKPSEVDVIKPLNNLIQSTYNGAS-----------------EEEKGKYGEAVNEFS 48
            |.::| :|..|..|:        |.:.|...|.                 ||...|..:.::..:
plant     3 MMQYL-IPEPKTKEI--------LYEKTLQAAGPITLGEVKELTSKRKIIEESVNKTSKVIDSTT 58

  Fly    49 KQRNTAIWKFFE-------KYEASLEIVYAYYDQICALETKISVSELQIPFKWKDAFDKGSIFGG 106
            ::....:....|       :|...|..:..|.|:|      ..||.|:|  :|.         .|
plant    59 REMTRGLTSACEQDLHKLGEYLPLLFNLVHYTDKI------KRVSNLKI--RWS---------SG 106

  Fly   107 KISLTHTSLLYEKVC---------------VLFNIAALQSNIAANQSLDSDDGLKLTIKLLQQSA 156
            .||.|    |.::.|               ||| |.|::....|.:.:.:|.  |..:.:.::::
plant   107 LISQT----LIQRTCPKFFQVDNIMFEFGMVLF-IYAVKLRERAMELVSTDS--KKAVAVYREAS 164

  Fly   157 GIFQYLK----GATPAAVPSEPTPDLSQDTLTVLQALMVAQAQEVFILKAIKDNLKDQIIAKLCC 217
            |:|.:|.    ......:|....|:|:....:.|..|.:|:.|.|...||.:......:::||..
plant   165 GVFHHLSHEILPLLQTCLPPGKLPELTPPLCSALSLLCLAEGQAVTTEKAEESGKSASLLSKLHF 229

  Fly   218 Q----AEESYADVLRAMQKE----SVRSLWEKEWIPTIAGKQAGFHAL-TQLYQSLVCRAAKKIG 273
            .    ..|:||.:...:..|    |.|.|   |::.|:    ...|.| :|.|.:.:..:..::|
plant   230 GIFQFLSEAYALLSSRLTGEYKDLSTRFL---EYVTTM----GALHELKSQKYLAELLESEDRVG 287

  Fly   274 EEIARLRNAIDLFKAAQTRSGNETYLDEYFSRAK----RNLTESTKDNEFIYNEIIPELSTLTSP 334
            :.:..||.|:...|.: |.|.::.:: ..|.:.:    :|:.:..|.|:.:..:.||....:..|
plant   288 DAVGVLRRALAAAKKS-TPSKDDKWI-AIFKKEREDVAKNMAKYEKLNDSMMLQKIPIDREIPFP 350

  Fly   335 GKAQLAKPLP 344
            ...::...:|
plant   351 KGEKIVNLIP 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ALiXNP_651582.1 BRO1_Alix 2..347 CDD:185763 77/398 (19%)
V_Alix 362..698 CDD:185748
ALIX_LYPXL_bnd 415..701 CDD:290660
MFMR 733..822 CDD:285072
AT1G13310NP_563927.3 BRO1_Alix_like_2 6..363 CDD:185770 77/396 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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