DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ALiX and mop

DIOPT Version :9

Sequence 1:NP_651582.1 Gene:ALiX / 43330 FlyBaseID:FBgn0086346 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_648722.2 Gene:mop / 39610 FlyBaseID:FBgn0036448 Length:1833 Species:Drosophila melanogaster


Alignment Length:893 Identity:219/893 - (24%)
Similarity:361/893 - (40%) Gaps:169/893 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LKKPSEVDVIKPLNNLIQSTYNGASEEEKGKYGEAVNEFSKQRNTAIWKFFEKYEASLEIVYAYY 73
            ||...|......|...|...|:    |:...|.:.|:.....||.|:    ...:....::..||
  Fly    14 LKSSPEGTSFAALKKYIAEFYH----EDPEAYSKEVHALETLRNQAM----HTTKDGAPVMKRYY 70

  Fly    74 DQICALETKI-SVSELQI-PFKWKDAFDKGSIFGGKISLTH--TSLLYEKVCVLFNIAALQSNIA 134
            .|:.||:.:. .:::..| .|||||.:.         |..|  |.|.:|:..||||||||.:...
  Fly    71 CQLHALQNRFPQLADRGIFTFKWKDLYH---------SAVHEVTDLRFERAAVLFNIAALHTQSG 126

  Fly   135 ANQSLDSDDGLKLTIKLLQQSAGIFQYLKG--ATPAAVPSEPTPDLSQDTLTVLQALMVAQAQEV 197
            |:.:....||:|:.....|.:|..:..|:.  |.........||:|    |...|.:..|||||.
  Fly   127 ASVTRGDVDGMKMACTHFQAAAWAYGELRERYANVNGGGDFMTPEL----LVFQQQVCFAQAQEC 187

  Fly   198 FILKAIKDNLKDQIIAKLCCQAEESYADVLRAMQ------------KESVRSLWEKEWIPTIAGK 250
            .:.|::.||.|..|:||:..|....|...|.|:.            ..||..||:|    .:..|
  Fly   188 ILEKSLIDNRKPHIVAKVTAQIVVYYGAALAALLTGGDDGPVAQVIDSSVYKLWKK----YVRFK 248

  Fly   251 QAGFHALTQLYQSLVCRAAKKIGEEIARLRNAIDLFKAAQTRS---GNETYLDEYFS------RA 306
            ......:..|||.......:::||.:...:.:.|..:.|:..|   .::..::|..|      .|
  Fly   249 INYLTCILYLYQGQHSEEKRQMGERVTLYQASWDKLEEARKESKGLPDQREINESLSFTADVVEA 313

  Fly   307 KRNLTESTKDNEFIYNEIIPELSTLTSPGKAQLAKPLPIAVPLAENF-KDIFSSLVPVELHRALT 370
            ||.  .:..:|||||:|.:|||||:.:...|.|...:...|...|:. .|||:.|||::.|.|.:
  Fly   314 KRK--NAKNENEFIYHEAVPELSTIAAVQGANLVNGIGFQVSDEEHAGPDIF
ARLVPMKAHEASS 376

  Fly   371 ASDMRRNEIVNVEIMKLREATQTLNAVLASLNLPAAVETADGNSGLPPSLKEKANEVRQKGGIEN 435
            .....:.:::......|.|....|.:.::||.|    :..:.|       :|:||::.| |.::.
  Fly   377 LYSEEKAKLLRKYGALLEEKDTQLESYMSSLTL----DNLNIN-------EEQANKLPQ-GIVDR 429

  Fly   436 V------QTMLKDLPELLNRNREILDETERLLDE-----ERDSDNQLRAQFKDRWTRISSDKLTE 489
            .      :|.:.||.|.:::..||..:.|..|.|     |.::..:...|......|..:..:||
  Fly   430 CAALNANKTAISDLVEAMSQLAEITADVETNLGEISSMLEAEAKAEREFQSATGVQRTPNAHITE 494

  Fly   490 MFRTNAKKYREVITNAIEADKVVRQKFEANQKGIQLLSLPPDQIQQSLPSASGSVDPNCSSVQR- 553
            :.| ..:||.|....|.|::..:|:....:...:::|:.|..:|||.:|..|..:  |.:.:.| 
  Fly   495 LSR-EFQKYSEAHARAGESNNTLRKAMSLHVNNLKILARPLPEIQQLMPKLSSEL--NTTEIFRD 556

  Fly   554 LKKLMDDVETIKAEREAIESELK---------------GATFNMKDEFLIALQKDGAIDEPA-LS 602
            :|.:::.|..:||:|....::|:               |....::..|...|.|...|.|.. .:
  Fly   557 VKLILNKVNEMKAQRAQFHADLRIAINEDDITGKVIAHGGQEGLQALFATELGKHDKITELLDQN 621

  Fly   603 LARIGQVLNPLQQQVRESVERQQSLVSEIQSAHGAFVSETGSCGSSRDTLYQELATAFDSYIELS 667
            :...|.:|    |.:.|:..:...::..:|...           ..|:..|..||.::|.|.:|.
  Fly   622 MVAQGNIL----QALTENYAKAAPVLKTLQDVK-----------QKREHFYSSLAASYDVYEDLL 671

  Fly   668 GNLQEGTKFYNDLTQLLVVFQNKISDFVFARKTEKEELLKDLTTESSRQACPATPALPSHYASTS 732
            ....:|.:||..|...:   |..::.|..||..:.||  :....:|.:.|  .||.:....|.|:
  Fly   672 AKSAKGLEFYKKLAGNV---QKLLTRFRSARDVQSEE--RQQRMQSVKAA--TTPVVSKPIAETT 729

  Fly   733 GSGSDIPPGSAPSVPPAASTANIPYPAQVQGMPIPYGAQPGVPYPAYVPA--PMP-QSFNP---- 790
                        .||..:||..:....:.:      .|......|||||.  |:| .|.||    
  Fly   730 ------------PVPAVSSTPKLRDYLKAK------AAMADASNPAYVPTVRPVPVGSENPTQAA 776

  Fly   791 --YATLPYPGNYQYQGFPQGPPPGHYGTYPGSYANQQ------GGYPN 830
              |||.|          |..|||      |.|...||      .||.|
  Fly   777 CSYATAP----------PNEPPP------PYSLTQQQYFDPSAAGYTN 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ALiXNP_651582.1 BRO1_Alix 2..347 CDD:185763 97/364 (27%)
V_Alix 362..698 CDD:185748 75/363 (21%)
ALIX_LYPXL_bnd 415..701 CDD:290660 67/313 (21%)
MFMR 733..822 CDD:285072 25/97 (26%)
mopNP_648722.2 BRO1_HD-PTP_like 2..363 CDD:185762 100/375 (27%)
V_HD-PTP_like 368..702 CDD:185747 77/366 (21%)
ALIX_LYPXL_bnd 421..699 CDD:290660 62/299 (21%)
Med15 808..>1246 CDD:255446 1/1 (100%)
Y_phosphatase 1558..1788 CDD:278528
PTPc 1559..1745 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2220
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.704428 Normalized mean entropy S2147
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D498845at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47081
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23030
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R147
SonicParanoid 00.000 Not matched by this tool.
76.900

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