DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ALiX and PTPN23

DIOPT Version :9

Sequence 1:NP_651582.1 Gene:ALiX / 43330 FlyBaseID:FBgn0086346 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_056281.1 Gene:PTPN23 / 25930 HGNCID:14406 Length:1636 Species:Homo sapiens


Alignment Length:863 Identity:221/863 - (25%)
Similarity:377/863 - (43%) Gaps:125/863 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GKYGEAVN------EFSKQRNTAIWKFFEKYEASLEIVYAYYDQICALETKI---SVSELQIPFK 93
            |:..||.|      |..:|....:.:.||    ...::..|..|:..|::::   |..|..:|..
Human    35 GENPEAYNEELKKLELLRQNAVRVPRDFE----GCSVLRKYLGQLHYLQSRVPMGSGQEAAVPVT 95

  Fly    94 WKDAFDKGSIFGGKISLTHTSLLYEKVCVLFNIAALQSNIAANQSLDSDDGLKLTIKLLQQSAGI 158
            |.:      ||.|| |:.|..:.||:.|:|:|:.||.|.:.|.....|::|:|::....|.:||.
Human    96 WTE------IFSGK-SVAHEDIKYEQACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGA 153

  Fly   159 FQYLKGATPAAVPSEPTPDLSQDTLTVLQALMVAQAQEVFILKAIKDNLKDQIIAKLCCQAEESY 223
            |.||:...|.|.    :.|:|:..||:...||:.||||..:.|::.||.|..::|::..|..:.|
Human   154 FAYLREHFPQAY----SVDMSRQILTLNVNLMLGQAQECLLEKSMLDNRKSFLVARISAQVVDYY 214

  Fly   224 ADVLRAMQKESVRSLW---EKEWIPTIAGKQAGFHALTQLYQSLVCRAAKKIGEEIARLRNAID- 284
            .:..||::.....||.   :|:|...:..|...|.|:..|:........:|.||.:|..::|:| 
Human   215 KEACRALENPDTASLLGRIQKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQKFGERVAYFQSALDK 279

  Fly   285 LFKAAQTRSGN-ETYLDEY----------FSRAKRNLTESTKDNEFIYNEIIPELSTLTSPGKAQ 338
            |.:|.:...|. :|..|..          ::.||       |||:|||:|.:|.|.||.....|.
Human   280 LNEAIKLAKGQPDTVQDALRFTMDVIGGKYNSAK-------KDNDFIYHEAVPALDTLQPVKGAP 337

  Fly   339 LAKPLPI-AVPLAENFKDIFSSLVPVELHRALTASDMRRNEIVNVEIMKLREATQTLNAVLASLN 402
            |.||||: ....|....|||:.|||:..|.|.:.....:.:::...:.|:.:..:.|:..:.|:.
Human   338 LVKPLPVNPTDPAVTGPDIF
AKLVPMAAHEASSLYSEEKAKLLREMMAKIEDKNEVLDQFMDSMQ 402

  Fly   403 L-PAAVETADGNSGLPPSLKEKA-------NEVRQ--------KGGIENVQTMLKDLPELLNRNR 451
            | |..|:..|..|.:||.|.||.       :.||.        .|...:|:..|||:       |
Human   403 LDPETVDNLDAYSHIPPQLMEKCAALSVRPDTVRNLVQSMQVLSGVFTDVEASLKDI-------R 460

  Fly   452 EILDETERLLDEERDSDNQLRAQFKDRWTRISSDKLTEMFRTNAKKYREVITNAIEADKVVRQKF 516
            ::|:|.|.|..:.:::..|..|     .:..|..:|.|:.|..| ||.||...|...:..:.:..
Human   461 DLLEEDELLEQKFQEAVGQAGA-----ISITSKAELAEVRREWA-KYMEVHEKASFTNSELHRAM 519

  Fly   517 EANQKGIQLLSLPPDQIQQSLPSASGSVDPNCSSV-QRLKKLMDDVETIKAEREAIESELKGATF 580
            ..:...::|||.|.||::.:||:.  ::.|...:| |.||:::..|:.::.:|.::|.:|:  ..
Human   520 NLHVGNLRLLSGPLDQVRAALPTP--ALSPEDKAVLQNLKRILAKVQEMRDQRVSLEQQLR--EL 580

  Fly   581 NMKDEFLIALQKDGAIDEPAL---SLARIGQVLNPLQQQVRESVERQQSLVSEIQSAHGAFVSET 642
            ..||:...:|......:...|   .|.:..|:...|:|.: .:.:|....::|....:.|.....
Human   581 IQKDDITASLVTTDHSEMKKLFEEQLKKYDQLKVYLEQNL-AAQDRVLCALTEANVQYAAVRRVL 644

  Fly   643 GSCGSSRDTLYQELATAFDSYIELSGNLQEGTKFYNDLTQLLVVFQNKISDFVFARKTEKEELL- 706
            .......::..|.|..::::|.:|....|||..||.||...:.....:......||:..:::|| 
Human   645 SDLDQKWNSTLQTLVASYEAYEDLMKKSQEGRDFYADLESKVAALLERTQSTCQAREAARQQLLD 709

  Fly   707 KDLTTESSRQACPATPALPSHYASTSGSGSDIPPGSAPSVPP------------AASTANIPYPA 759
            ::|..:...:.....|.||....|.:....| ||....|:||            ..|...:.:| 
Human   710 RELKKKPPPRPTAPKPLLPRREESEAVEAGD-PPEELRSLPPDMVAGPRLPDTFLGSATPLHFP- 772

  Fly   760 QVQGMPIPYGAQPGVPYPAYVPAPMP--------QSFNPYATLPYPGNYQYQGFPQGPPPGHYGT 816
                 |.|:.:..| |.|.|:..|:|        |...|.|..|:       ..|..|.|   ..
Human   773 -----PSPFPSSTG-PGPHYLSGPLPPGTYSGPTQLIQPRAPGPH-------AMPVAPGP---AL 821

  Fly   817 YPG-SYANQQGGYPNQKP 833
            ||. :|..:.|..|...|
Human   822 YPAPAYTPELGLVPRSSP 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ALiXNP_651582.1 BRO1_Alix 2..347 CDD:185763 98/333 (29%)
V_Alix 362..698 CDD:185748 79/355 (22%)
ALIX_LYPXL_bnd 415..701 CDD:290660 70/304 (23%)
MFMR 733..822 CDD:285072 25/109 (23%)
PTPN23NP_056281.1 BRO1_HD-PTP_like 2..357 CDD:185762 100/343 (29%)
TPR 1 250..283 9/32 (28%)
V_HD-PTP_like 362..700 CDD:185747 79/355 (22%)
TPR 2 374..407 5/32 (16%)
ALIX_LYPXL_bnd 417..701 CDD:290660 69/301 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 701..812 27/125 (22%)
His 770..1130 22/87 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 888..1151
6 X 2 AA approximate tandem repeats of P-Q 953..964
Y_phosphatase 1220..1450 CDD:278528
PTPc 1220..1449 CDD:238006
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1513..1636
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2220
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D498845at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R147
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.850

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