DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ALiX and RHPN1

DIOPT Version :9

Sequence 1:NP_651582.1 Gene:ALiX / 43330 FlyBaseID:FBgn0086346 Length:836 Species:Drosophila melanogaster
Sequence 2:XP_011515119.1 Gene:RHPN1 / 114822 HGNCID:19973 Length:729 Species:Homo sapiens


Alignment Length:440 Identity:104/440 - (23%)
Similarity:169/440 - (38%) Gaps:104/440 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKFLGVP-----LKKPSEVDVIKPLNNLIQSTY--NGASEEEKGKYGEAVNEFSK--QRNTAIWK 57
            |:.:.||     ||:..|:|...||..||...:  :|||.|.:.:..||:.:..:  .||     
Human   155 SEAVTVPMIPLGLKETKELDWSTPLKELISVHFGEDGASYEAEIRELEALRQAMRTPSRN----- 214

  Fly    58 FFEKYEASLEIVYAYYDQICALETKI--SVSELQIPFKWKDAFDKGSIFGGKISLTHTSLLYEKV 120
                 |:.||::.|||:|:|.|:.:.  ....|.:.|.......:.....| :.....:|.:||.
Human   215 -----ESGLELLTAYYNQLCFLDARFLTPARSLGLFFHCLTQHCRYDSLTG-VPAQQRALAFEKG 273

  Fly   121 CVLFNIAALQSNIAANQSLDSDDGLKLTIKLLQQSAGIFQYLKGATPAAVPSEPTPDLSQDTLTV 185
            .|||||.||.:.|.|.|.....:|.:..::..|::||.|..|:.....|    |:||:|..:|..
Human   274 SVLFNIGALHTQIGARQDRSCTEGARRAMEAFQRAAGAFSLLRENFSHA----PSPDMSAASLCA 334

  Fly   186 LQALMVAQAQE-VF------ILKAIKDNLKDQIIAKLCCQAEESYADVLRAMQKESVRSLWEKEW 243
            |:.||:||||| ||      ...|.:|.|....:|:...|....|..|.|.|.:..|.......|
Human   335 LEQLMMAQAQECVFEGLSPPASMAPQDCLAQLRLAQEAAQVAAEYRLVHRTMAQPPVHDYVPVSW 399

  Fly   244 IPTIAGKQAGFHALTQLYQSL-VC----------------------------------------- 266
            ...:..|...|.:|...:.:: :|                                         
Human   400 TALVHVKAEYFRSLAHYHVAMALCDGSPATEGELPTHEQVFLQPPTSSKPRGPVLPQELEERRQL 464

  Fly   267 -RAAKK---IGEE-------IARLRNAIDLFKAAQTRSGNETYLDEYFSRAKRNLTESTKDNEFI 320
             :|..|   :|:|       :.|:...:||.:|.         :.:...|:.....|..::::|.
Human   465 GKAHLKRAILGQEEALRLHALCRVLREVDLLRAV---------ISQTLQRSLAKYAELDREDDFC 520

  Fly   321 YNEIIPELSTLTSPGKAQLAKPLPIAVPLAENFK--DIFSSLVPVELHRA 368
            .....|::...|.      .|| ...:|.....|  |||..|.|:.:..|
Human   521 EAAEAPDIQPKTH------QKP-EARMPRLSQGKGPDIFHRLGPLSVFSA 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ALiXNP_651582.1 BRO1_Alix 2..347 CDD:185763 96/415 (23%)
V_Alix 362..698 CDD:185748 2/7 (29%)
ALIX_LYPXL_bnd 415..701 CDD:290660
MFMR 733..822 CDD:285072
RHPN1XP_011515119.1 HR1 74..158 CDD:294066 1/2 (50%)
BRO1_Rhophilin_1 162..552 CDD:185771 96/420 (23%)
PDZ 573..639 CDD:214570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2220
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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