DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HSPBAP1 and jmjd7

DIOPT Version :9

Sequence 1:NP_651581.2 Gene:HSPBAP1 / 43329 FlyBaseID:FBgn0263025 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001017615.1 Gene:jmjd7 / 550278 ZFINID:ZDB-GENE-050417-86 Length:311 Species:Danio rerio


Alignment Length:311 Identity:69/311 - (22%)
Similarity:117/311 - (37%) Gaps:95/311 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ELSSKLRDLILNTHVPLVLE-----QFPLKW-----EC-FEGSLHDWCKRFDKEATCLPAFE--- 52
            :...:.|:|.||..||.:.|     ||...|     .| ...:.:||           ||..   
Zfish    10 DFPKEARELYLNDAVPYLDEPLSPLQFYRDWIGPNKPCIIRNAFNDW-----------PALSKWN 63

  Fly    53 ---------LMALADSSTPQW-------------ERKRTKSSQLLNMQQFLRKYGVLDGDSTHWA 95
                     ...::.:.||..             |.::...|.||:         :::|.....|
Zfish    64 PTYLREKVGSKVISVAVTPNGFADAVNGNRFVMPEERQMSFSSLLD---------IVEGKIKSSA 119

  Fly    96 AYQYKK-----ADEVPL---SCRSGIGFSSFGFPDIGNDYRFWLGSEQANTPCHYDTFGVNIVVQ 152
            .:..:|     .:|:|.   ..::.|.:.|.....:.:...||||.|.|.|..|.|.: .|:...
Zfish   120 VFYVQKQCSNLMEEIPELTGDVQTHIPWMSEALGKLPDAVNFWLGEESAVTSMHKDHY-ENLYCV 183

  Fly   153 VHGCKSWLLFPP-ETPLQSTRIPYE--ETSVY---------CLENFYAP-------DPAK----- 193
            :.|.|.::|.|| :.|.    ||||  :.:.|         .::...:|       ||.|     
Zfish   184 ISGQKEFILLPPTDRPF----IPYELYQPATYRQKDDGTFEIVDEENSPKVPWIPLDPLKPDFER 244

  Fly   194 ISSYEHLGRQAYHCNLQPGNVLIVPRHWWHYVEAKSTSLSVNYWVPLKVDM 244
            ..||.|  .:|.||.::.|.:|.:|..|:|:|......::||:|..::.|:
Zfish   245 FPSYRH--AKALHCTVKAGEMLYLPSLWFHHVRQSHGCIAVNFWYDMEYDI 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HSPBAP1NP_651581.2 cupin_like 11..237 CDD:304367 65/293 (22%)
jmjd7NP_001017615.1 Cupin_8 33..293 CDD:290351 61/286 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1385616at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.