DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HSPBAP1 and Jmjd7

DIOPT Version :10

Sequence 1:NP_651581.2 Gene:HSPBAP1 / 43329 FlyBaseID:FBgn0263025 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001108128.1 Gene:Jmjd7 / 100137086 RGDID:2290039 Length:316 Species:Rattus norvegicus


Alignment Length:329 Identity:74/329 - (22%)
Similarity:120/329 - (36%) Gaps:100/329 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ELSSKLRDLILNTHVPLVLEQ-----FPLKWEC------FEGSLHDWCKRFDKEATCLPAFE--- 52
            |..:..|||.:...||.:.|.     |...|.|      ...:|..|           ||.:   
  Rat    15 EFPAAARDLNVPRVVPYLDEPPSPLCFYRDWVCPNRPCIIRNALQHW-----------PALQKWS 68

  Fly    53 ---LMALADSS------TPQW-------------ERKRTKSSQLLNMQQFLRKYGVLDGDSTH-W 94
               |.|...|:      ||..             ..:|...|.:|:         ||:|.:.| .
  Rat    69 FSYLRATVGSTEVSVAVTPDGYADAVRGDRFVMPAERRLPVSHVLD---------VLEGQAQHPG 124

  Fly    95 AAYQYKKADEVPL-------SCRSGIGFSSFGFPDIGNDYRFWLGSEQANTPCHYDTFGVNIVVQ 152
            ..|..|:...:|.       ...|.:.::|.....:.:...||||...|.|..|.|.: .|:...
  Rat   125 VLYVQKQCSNLPTELPQLLSDIESHVPWASESLGKMPDAVNFWLGDAAAVTSLHKDHY-ENLYCV 188

  Fly   153 VHGCKSWLLFPP-ETPLQSTRIPY-----------EETSVYCLE------------NFYAPDPAK 193
            |.|.|.:||.|| :.|.    |||           ||.:...::            :..|||.|:
  Rat   189 VSGEKHFLLHPPSDRPF----IPYNLYTPATYQLTEEGTFRVVDEEAMEKVPWIPLDPLAPDLAR 249

  Fly   194 ISSYEHLGRQAYHCNLQPGNVLIVPRHWWHYVEAKSTSLSVNYWVPLKVDMDLILDEFLVMHIVE 258
            ..||..  .:|.||.::.|.:|.:|..|:|:|:.....::||:|..::.|:     ::....:::
  Rat   250 YPSYSQ--ARALHCTVRAGELLYLPALWFHHVQQSHGCIAVNFWYDMEYDL-----KYSYFQLMD 307

  Fly   259 SFVR 262
            |..|
  Rat   308 SLTR 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HSPBAP1NP_651581.2 Cupin_8 <76..237 CDD:463936 48/192 (25%)
Jmjd7NP_001108128.1 Cupin_8 38..297 CDD:463936 64/285 (22%)

Return to query results.
Submit another query.