DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sce and PCGF6

DIOPT Version :10

Sequence 1:NP_477509.1 Gene:Sce / 43327 FlyBaseID:FBgn0003330 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001011663.1 Gene:PCGF6 / 84108 HGNCID:21156 Length:350 Species:Homo sapiens


Alignment Length:225 Identity:48/225 - (21%)
Similarity:76/225 - (33%) Gaps:60/225 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 VKPVEGAPKESCKNDEQLDVLAID-SDLDDGMKLEDE-YNPPSSSAASNNNSDDSEYEVKPRRSK 167
            :|.::..|||..       :|.:| .|.||.:|:.:| .:...|.|...|.:...:.|.......
Human     6 LKKLKVIPKEGY-------LLLLDFDDEDDDIKVSEEALSEVKSPAFDKNENISPQAEADEDMGD 63

  Fly   168 RVTDTADRTRTTRRGRSPKSEAGTRSPGEQKKK--SPIVVRRGQATNQKLREFYDMKCEMCEEQL 230
            .|....|           |||.........|:|  ...|....:.:||||..|    |:..|.:.
Human    64 EVDSMLD-----------KSEDDIYKTLHIKRKWMETYVKESFKCSNQKLERF----CKTNERER 113

  Fly   231 ESFNALKKHYYQTHRTRGYIKCCGRTFHKQYRLLEHLSYHVGSSMVRCEECNKTFSSRSYLLVHR 295
            ::.|......|.|            ||.|....::..:          ||..|:.:|        
Human   114 KNINNKFCEQYIT------------TFQKSDMDVQKFN----------EEKEKSVNS-------- 148

  Fly   296 SRVHGQPEDRPYKCTQCHQSYALECHLKAH 325
                .|.|.:..|.::|.|:..||...:.|
Human   149 ----CQKEQQALKLSKCSQNQTLEAVKEMH 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SceNP_477509.1 COG5222 <10..154 CDD:227547 14/50 (28%)
RING_Ubox 41..110 CDD:473075 1/4 (25%)
RAWUL_RING1_like 326..431 CDD:340606 48/225 (21%)
PCGF6NP_001011663.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..115 30/130 (23%)
RING-HC_PCGF5 125..215 CDD:438395 16/84 (19%)
RAWUL_PCGF6 252..341 CDD:340605
Blue background indicates that the domain is not in the aligned region.

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