DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sce and AT1G28327

DIOPT Version :10

Sequence 1:NP_477509.1 Gene:Sce / 43327 FlyBaseID:FBgn0003330 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_174154.2 Gene:AT1G28327 / 839728 AraportID:AT1G28327 Length:274 Species:Arabidopsis thaliana


Alignment Length:202 Identity:38/202 - (18%)
Similarity:66/202 - (32%) Gaps:50/202 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 DPGHSGTS---AASAITSASNAAPSSSANSGASTSATRMQVD----DASNPPSVRSTPSP----- 270
            |.|.||.|   ....:||:|....|.|......|:....:.|    :...|.|...:...     
plant    63 DEGWSGGSKKVKVRGLTSSSGDGDSLSYPFENETTIRNREKDRLMLEIFGPESTDDSDESGTEEE 127

  Fly   271 -VPSNSSS-------SKPKRAM-------SVLTSERSEESESDSQMDCR---TEGDSNIDTEGEG 317
             :.:|..|       .:.||:|       .:|.:...:...:..:||.:   ...|:::....: 
plant   128 FMETNLMSLVSLQWGKRGKRSMRKGTWKRHILENHVGQHKNTQDEMDIQVLLVSMDASVIPNLQ- 191

  Fly   318 NGELGINDEIELVFKPHPTEMSADNQLIRALKENCVRYIKTTANATVDHLSKYLAMRLTLDLGAD 382
                  |.::..  ||:.|           ||..|..|:.....|..:.:..|:...|..:|...
plant   192 ------NPQVSC--KPNVT-----------LKSLCEMYVAPYVEAQAEKIEMYVVKELVAELTMI 237

  Fly   383 LPEACRV 389
            .|...||
plant   238 DPHRDRV 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SceNP_477509.1 COG5222 <10..154 CDD:227547
RING_Ubox 41..110 CDD:473075
RAWUL_RING1_like 326..431 CDD:340606 14/64 (22%)
AT1G28327NP_174154.2 None
Blue background indicates that the domain is not in the aligned region.

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