DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sce and RING1A

DIOPT Version :9

Sequence 1:NP_477509.1 Gene:Sce / 43327 FlyBaseID:FBgn0003330 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001154760.1 Gene:RING1A / 834451 AraportID:AT5G44280 Length:525 Species:Arabidopsis thaliana


Alignment Length:451 Identity:100/451 - (22%)
Similarity:169/451 - (37%) Gaps:103/451 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QRKPQEVITDSTE-IAVSPRSLHSELMCPICLDMLK-------KTMTTKEC---LHRFCSDCIVT 73
            :|.|..:..|.:| :.:....:..::.|||||..:|       .....|:|   ..:||:     
plant   109 ERSPSSISGDQSEFMEIDLGEIRKDVQCPICLVGMKFLRLFISYYKENKDCDGMSPQFCA----- 168

  Fly    74 ALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYE----AIQEKVMAKFNQTQSQQA 134
              ...|.|||.|||...|:||||.||.||.||:.::.:.:.||    |..|..||:..|.|:..|
plant   169 --TFKNNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIA 231

  Fly   135 LVNSINEGIKLQSQNRPQRFRTKGGGGGGGGGGNGNGAANVAAPPAPGAPTAVGRNA-----SNQ 194
            .::      :.||:...:|            ...|..||.:...|...:.:...||:     .|.
plant   232 QIS------QRQSEALVKR------------RSLGKEAAVLMRSPRIASGSRRRRNSRNMEQQNA 278

  Fly   195 MHVHDTASNDSNSNTNSIDRENRDPGHSGTSAASAI---------TSASNAAPSSSA----NSGA 246
            ...|:...||.|:|      ..||...|.....:.:         ||.|...||||.    |...
plant   279 SEAHEDDDNDDNNN------RGRDKDSSSDERGTEVRQKKRRKRSTSRSTQHPSSSGANKNNGNC 337

  Fly   247 STSATRMQVDDASNPPSVRSTPSPVPSNSSSSKPKRAMSVLTSERSEESESDSQMDCRTEG-DSN 310
            :.:.|.:..|.....|.:...|..:......::........||..|.:|..:::::...|. .|:
plant   338 ADNDTEVYRDTKGISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVNKLVEYLRSS 402

  Fly   311 IDTEGEGNGELGINDEIELVFKPHPTEMSADNQLIRALKENCVRYIKTTANATVDHLSKYLAMRL 375
            :|         |.:.|:::    |...:|.|.:.|..|.:   .|:.......|..|.:::|:::
plant   403 VD---------GSSVELDI----HVKLVSLDTKCIPDLPQ---PYLCCRPTLLVKQLREFVALQI 451

  Fly   376 TLD------------LGAD-----LPEACRVLNFCIYVAPQPQQLVILNGNQTLHQVNDKF 419
            .|.            :|.|     ||.....     ..|....:::.|..|:||.::...|
plant   452 HLKTEEVELLVTRRRVGEDAAIENLPAVTPA-----SAAASKDEMLSLEDNETLSRLKIDF 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SceNP_477509.1 RING 45..89 CDD:238093 17/53 (32%)
RAWUL 336..431 CDD:292824 19/101 (19%)
RING1ANP_001154760.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 65 1.000 Domainoid score I3621
eggNOG 1 0.900 - - E1_KOG0311
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 110 1.000 Inparanoid score I2068
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003138
OrthoInspector 1 1.000 - - otm2621
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2531
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.860

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