DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sce and Pcgf6

DIOPT Version :10

Sequence 1:NP_477509.1 Gene:Sce / 43327 FlyBaseID:FBgn0003330 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001347561.1 Gene:Pcgf6 / 71041 MGIID:1918291 Length:359 Species:Mus musculus


Alignment Length:388 Identity:69/388 - (17%)
Similarity:108/388 - (27%) Gaps:180/388 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ELSLYELQ----RKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVT 73
            |:|.:.|:    |...|   |..|..::...|...::|.||...|....|..||||.||..|||.
Mouse   103 EMSHFSLRLESGRADSE---DEEERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVR 164

  Fly    74 ALRSGNKECPTCRKKLVSKR---SLRADPNFDLLISKIYPSREEYEAIQEKVMAKFNQTQSQQAL 135
            .....|: ||.|...:...:   ::|.|.....::.|:..:.||.|   :|.|..|.:       
Mouse   165 HFYYSNR-CPKCNIVVHQTQPLYNIRLDRQLQDIVYKLVINLEERE---KKQMHDFYK------- 218

  Fly   136 VNSINEGIKLQSQNRPQRFRTKGGGGGGGGGGNGNGAANVAAPPAPGAPTAVGRNASNQMHVHDT 200
                ..|:::                                 |.|.|                 
Mouse   219 ----ERGLEV---------------------------------PKPAA----------------- 229

  Fly   201 ASNDSNSNTNSIDRENRDPGHSGTSAASAITSASNAAPSSSANSGASTSATRMQVDDASNPPSVR 265
                                                                             
Mouse   230 ----------------------------------------------------------------- 229

  Fly   266 STPSPVPSNSSSSKPKRAMSVLTSERSEESESDSQMDCRTEGDSNIDTEGEGNGELGINDEIELV 330
              |.||||:...:|     .||.|......|.|..:.....| :|.||   |:.:..:..|    
Mouse   230 --PQPVPSSKGKTK-----KVLESVFRIPPELDMSLLLEFIG-ANEDT---GHFKHSLRFE---- 279

  Fly   331 FKPHPTEMSADNQLIRALKENCVRYIKTTANATVDHLSKYLAMRLTLDLGADLPEACRVLNFC 393
                |.|.               ::::.:..||:.|:.|:|..::.||      .||:|...|
Mouse   280 ----PLEK---------------KFVRVSGEATIGHVEKFLRRKMGLD------PACQVDIIC 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SceNP_477509.1 COG5222 <10..154 CDD:227547 36/147 (24%)
RING_Ubox 41..110 CDD:473075 21/71 (30%)
RAWUL_RING1_like 326..431 CDD:340606 14/68 (21%)
Pcgf6NP_001347561.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..116 3/12 (25%)
RING-HC_PCGF6 128..186 CDD:438396 19/58 (33%)
RAWUL_PCGF6 255..350 CDD:340605 20/96 (21%)

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