DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sce and Pcgf5

DIOPT Version :10

Sequence 1:NP_477509.1 Gene:Sce / 43327 FlyBaseID:FBgn0003330 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001427172.1 Gene:Pcgf5 / 681178 RGDID:1583513 Length:253 Species:Rattus norvegicus


Alignment Length:90 Identity:31/90 - (34%)
Similarity:40/90 - (44%) Gaps:4/90 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSK---RSLRADPNFDLLI 105
            :.|.||...|.|..|..||||.||..|||......| :||.|..::...   ..||.|...:.:|
  Rat    16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSN-DCPRCGNQVHETNPLEMLRLDNTLEEII 79

  Fly   106 SKIYPSREEYEAIQEKVMAKFNQTQ 130
            .|:.|...|.|..:|....|.|:.|
  Rat    80 FKLVPGLREQELQRELEFWKKNKPQ 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SceNP_477509.1 COG5222 <10..154 CDD:227547 31/90 (34%)
RING_Ubox 41..110 CDD:473075 24/68 (35%)
RAWUL_RING1_like 326..431 CDD:340606
Pcgf5NP_001427172.1 None
Blue background indicates that the domain is not in the aligned region.

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