Protein Alignment Sce and traip

DIOPT Version :9

• Sequence 1: NP_477509.1
• Gene: Sce / 43327
• FlyBaseID: FBgn0003330
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_001017318.1
• Gene: traip / 550072
• XenbaseID: XB-GENE-922321
• Length: 463
• Species: Xenopus tropicalis
• Alignment Length: 341
• Identity: 58/341 - (17%)
• Similarity: 120/341 - (35%)
• Gaps: 87/341 - (25%)

  Fly    46 CPICLDML--KKTMTTKECLHRFCSDCIVTALRSG-NKECPTCRKKLVSKRSLRADPNFDLLISK 107
            |.||.|..  .:.:....|.|.|..:|::....|. ::.||.||.::.|::          :|:|
 Frog     7 CTICSDFFDNSRDVAAVTCGHTFHQECLLQWFHSAPHRTCPQCRIQVSSRQ----------IINK 61

  Fly   108 IY------------PS--REEYEAIQEKVMAKFNQTQSQQALVNSINE-----GIKLQSQNRPQR 153
            ::            |.  :.|.:.|:..::||..:.:..|.||:|:.|     .:.:||..:..
 Frog    62 LFFDIGGEEETVLDPESLKNEVDRIKVSLLAKEKEKRECQGLVDSLREMLDVRNVTIQSLQKEL- 125

  Fly   154 FRTKGGGGGGGGGGNGNGAANVAAPPAPGAPTAVGRNASNQMHVHDTASNDSNSNTNSIDRENRD 218
                                        |....:......||...|...:::.:..:.. |:.|:
 Frog   126 ----------------------------GDMEMLCSTLKKQMKFLDNQKSETKAAKDEA-RKLRN 161

  Fly   219 PGHSGTSAASAITSASNAAPSSSANSGASTSATRMQV-------DDASNPPSVRSTPSPVPSN-- 274
            ...:..|....:.:..........|.|:..:|.....       .:..|...||.:.:.:...
 Frog   162 KLKTMESIEVLLQAQRPEVEEMIRNMGSGQAAVEQLAIYCVSLKKEYENLKEVRKSSAEMTEKLR 226

  Fly   275 ----SSSSKPKRAMSVLTSERSEESESDSQMDCRTEGDSNIDTEGEGNGELGINDEIELVFKPHP 335
                :|::|.::|...||..|.|.|.|..::       .|.|.|     .:.:..::|.:.|...
 Frog   227 KEIFASNNKAQKAELQLTKVREELSASQKEL-------HNADKE-----IMSLKKKVEFLQKTLT 279

  Fly   336 TEMSADNQLIRALKEN 351
            |..:::..:.|.:.|:
 Frog   280 TPTASNEAISRLIFES 295

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sce	NP_477509.1	RING	45..89	CDD:238093	13/45 (29%)
		RAWUL	336..431	CDD:292824	3/16 (19%)
traip	NP_001017318.1	RING-H2_TRAIP	6..50	CDD:319394	11/42 (26%)
		RING-H2 finger (C3H2C3-type)	7..49	CDD:319394	11/41 (27%)
		Smc	<69..>275	CDD:224117	38/247 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3349
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.030