DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sce and Ring1

DIOPT Version :10

Sequence 1:NP_477509.1 Gene:Sce / 43327 FlyBaseID:FBgn0003330 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_997714.2 Gene:Ring1 / 309626 RGDID:3576 Length:406 Species:Rattus norvegicus


Alignment Length:492 Identity:204/492 - (41%)
Similarity:241/492 - (48%) Gaps:153/492 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTSLDPAPN--KTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECL 63
            ||:...|.|  ||||||||||.|.|||.|.|.||||||||||||||||||||||||.||||||||
  Rat     1 MTTPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECL 65

  Fly    64 HRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEAIQEKVMAKFNQ 128
            |||||||||||||||||||||||||||||||||.|||||.||||||||||||||.|::|:.:.::
  Rat    66 HRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130

  Fly   129 TQSQQALVNSINEGIKLQSQNRPQRFR----------TKGGGGGGGGGGNGNG-------AANVA 176
            ..:||||.:||.||:::|:.:|.||.|          |..||.|..|.|.|:|       |.:.|
  Rat   131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTTTMSGGEGEPGEGEGDGEDISSDSAPDSA 195

  Fly   177 APPAPGAPTAVGRNASNQMHVHDTASNDSNSNTNSIDRENRDPGHSGTSAASAITSASNAAPSSS 241
            ..|||..|...|...|:                            .||...:|..:...|....|
  Rat   196 PGPAPKRPRGGGAGGSS----------------------------VGTGGGAAGGACGGAGSEDS 232

  Fly   242 ANSGASTSATRMQVDDASNPPSVRSTPSPVPSNSSSSKPKRAMSVLTSERSEESESDSQMDCRTE 306
            .:.|.:.....:      .|||....|||                                    
  Rat   233 GDRGGTLGGGTL------GPPSPPGAPSP------------------------------------ 255

  Fly   307 GDSNIDTEGEGNGELGINDEIELVFKPHPTEMSADNQLIRALKENC-VRYIKTTANATVDHLSKY 370
                    .|..|      ||||||:|||        |:....|.| .||:|||.||||||||||
  Rat   256 --------PEPGG------EIELVFRPHP--------LLVEKGEYCQTRYVKTTGNATVDHLSKY 298

  Fly   371 LAMRLTLDL--------------------GAD-------------------LP--EACRVLNFCI 394
            ||:|:.|:.                    |.|                   ||  |......:.|
  Rat   299 LALRIALERRQQQETVEPGGPGGGASDTGGPDGGGGERGVSGGGEGPEEPALPSLEGVSEKQYTI 363

  Fly   395 YVAPQPQQLVILNGNQTLHQVNDKFWKVNKPMEMYYS 431
            |:||.......|||:.||..||:|||||::|:|:.|:
  Rat   364 YIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SceNP_477509.1 COG5222 <10..154 CDD:227547 113/143 (79%)
RING_Ubox 41..110 CDD:473075 65/68 (96%)
RAWUL_RING1_like 326..431 CDD:340606 54/146 (37%)
Ring1NP_997714.2 Necessary for transcriptional repression. /evidence=ECO:0000250 30..234 121/231 (52%)
RING-HC_RING1 43..112 CDD:438397 65/68 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 151..263 35/195 (18%)
Nuclear localization signal. /evidence=ECO:0000250 201..204 0/2 (0%)
Necessary for interaction with CBX2. /evidence=ECO:0000250 230..406 65/235 (28%)
RAWUL_RING1 261..400 CDD:340686 54/146 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..354 4/44 (9%)

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