Protein Alignment Sce and Pcgf2

DIOPT Version :10

• Sequence 1: NP_477509.1
• Gene: Sce / 43327
• FlyBaseID: FBgn0003330
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_001099306.1
• Gene: Pcgf2 / 287662
• RGDID: 1305097
• Length: 342
• Species: Rattus norvegicus
• Alignment Length: 332
• Identity: 69/332 - (20%)
• Similarity: 105/332 - (31%)
• Gaps: 112/332 - (33%)

  Fly    30 STEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKR- 93
            :|.|.::  .|:..|||.:|........|..||||.||..|||..|.: ||.||.|..::...|
  Rat     4 TTRIKIT--ELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65

  Fly    94 --SLRADPNFDLLISKIYPS---------REEYEAI------------QEKVMAKFNQTQSQQAL 135
              |:|:|.....::.|:.|.         |:.|.|.            :.:|:.:.........:
  Rat    66 LLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLEQEKGALGDDEI 130

  Fly   136 VN-SIN--EGIKLQSQNRPQRFRTKGGGGGGGGGGNGNGAANVAAPPAPGAPTAVGRNASNQMHV 197
            |: ||.  ||::       .|...|.....|.|.....|...:..|.|. ....:.:...|:|.|
  Rat   131 VSLSIEFYEGVR-------DREEKKSLVENGDGDKEKTGVRFLRCPAAM-TVMHLAKFLRNKMDV 187

  Fly   198 HD-----------------------------------------------------TASNDSNSNT 209
            ..                                                     |.|..:|
  Rat   188 PSKYKVEILYEDEPLKEYYTLMDIAYIYPWRRNGPLPLKYRVQPACKRLTLPTVPTPSEGTN--- 249

  Fly   210 NSIDRENRDPGHSGTSAASAITSASNAAPSSSANSGASTS----ATRMQVDDASNPPSVRSTPSP 270
                          ||.||...|.|:.|||.:.....|:|    ||......:|:.|......||
  Rat   250 --------------TSGASECESVSDKAPSPATLPATSSSLPSPATPSHGSPSSHGPPATHPTSP 300

  Fly   271 VPSNSSS 277
            .|.::::
  Rat   301 TPPSTAA 307

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sce	NP_477509.1	COG5222	<10..154	CDD:227547	38/150 (25%)
		RING_Ubox	41..110	CDD:473075	25/71 (35%)
		RAWUL_RING1_like	326..431	CDD:340606
Pcgf2	NP_001099306.1	RING-HC_PCGF4	5..101	CDD:438394	31/98 (32%)
		RAWUL_PCGF2	130..228	CDD:340684	15/105 (14%)
		PHA03247	<222..304	CDD:223021	21/98 (21%)