DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sce and SPCC548.05c

DIOPT Version :9

Sequence 1:NP_477509.1 Gene:Sce / 43327 FlyBaseID:FBgn0003330 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_587745.1 Gene:SPCC548.05c / 2539314 PomBaseID:SPCC548.05c Length:468 Species:Schizosaccharomyces pombe


Alignment Length:422 Identity:83/422 - (19%)
Similarity:142/422 - (33%) Gaps:139/422 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LDPAPNKTWELS-----LYELQR-----KPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMT 58
            |.|..|.|...|     :|:..|     :.::.|.|:..:..:.:.:...|.||||.:.|::..|
pombe    33 LIPQSNSTTFASSDATQMYKKSRISSNSENKKQIPDTKTLLETFQKIKKTLECPICTEALQRPFT 97

  Fly    59 TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRS------------LRADPNFDLLISKIYPS 111
            | .|.|.:|.:|::..|:. :|.|||||:||.::.|            ..::..|.|:.....|:
pombe    98 T-HCGHTYCYECLLNWLKE-SKSCPTCRQKLYTQPSPAYLVYEIMNVVAASNSGFPLVGINENPA 160

  Fly   112 REEYEAIQEKVMAKFNQTQSQQALVNSIN------------------------------------ 140
            :::.|.:.:.:..:.:....:..||:|.:                                    
pombe   161 KKQKEVLFDGMFKQEDSHYPRSILVDSEDGVLRCARCQWELENPYHCDHCGFQISDDQDSGREWF 225

  Fly   141 -EGIKLQSQNRPQRFRTKGGGGGGGGGGNGNGAANVAAPP----------------------APG 182
             :|...:|.:......|:||........|..|.|.:.|.|                      .||
pombe   226 WDGENAESDSSLNGDNTRGGNISTNRAFNNMGHAPITAVPQDWLRFDEGEEFVGSDLESDFSGPG 290

  Fly   183 APTA----VGRNASNQMHVHDTAS------NDSNSN---------------TNSIDRENRDPGHS 222
            ....    :...|::|:...::..      |.||.|               .|..| |.||.|  
pombe   291 EYDVDDGFIDNRATSQLSPVESDDDFVAPVNGSNGNGITALDSTDSEEIDIMNGFD-EERDSG-- 352

  Fly   223 GTSAASAITSASNAAPSSSANSGASTSATRMQVDDASNP--PSVRSTPSPVPSNSSSSKPKRAMS 285
            ||:..|        ...:..|.|......|.::.|..|.  .|:.|:.:..||:::         
pombe   353 GTNMVS--------RSETCYNDGQRYDELRRELADIQNESLDSLNSSSNNSPSHNN--------- 400

  Fly   286 VLTSERSEESESDSQMDCRTEGDSNIDTEGEG 317
              ...|.....||       |.:.||.|.|.|
pombe   401 --IHSRQHPFSSD-------EDEGNIVTNGTG 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SceNP_477509.1 RING 45..89 CDD:238093 18/43 (42%)
RAWUL 336..431 CDD:292824
SPCC548.05cNP_587745.1 RING 84..126 CDD:238093 18/43 (42%)
COG2888 <193..213 CDD:268082 0/19 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3349
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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