DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsdl2 and AT3G01980

DIOPT Version :10

Sequence 1:NP_651578.1 Gene:Hsdl2 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_001078090.1 Gene:AT3G01980 / 821069 AraportID:AT3G01980 Length:296 Species:Arabidopsis thaliana


Alignment Length:302 Identity:63/302 - (20%)
Similarity:102/302 - (33%) Gaps:99/302 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEIEKAGGKAYPC---V 71
            :.:.:|.....:.:.||...|:.|..:|:...        .|::.|..::|..:...|:|.   .
plant     6 KRVLMTSNGDEVSRNIAFHLAKHGCKLVMMGN--------EGSLRSIVDKIRDSIEGAFPADVIA 62

  Fly    72 VDVRDEQQV--RSAVEAAVAKFGGIDIVINNASAISL------TNTPDTDMKRYDLM-----HNI 123
            :|:..:.:|  .:||:.|....|..|..:|:.:...|      |..|        ||     |:.
plant    63 LDMESDSEVAFHAAVQKAWELSGHFDAFLNSYTYQGLICFLFFTTLP--------LMLLCVDHSF 119

  Fly   124 NTRGTFLVSKVCLPYLKKSNHAHILNIS-------PPLSMKPKWF-GPHVAYTMAKYGMSMCVLG 180
            ..:..||..||          ..||.:|       ..:::...|| ...||..|..:|....::.
plant   120 IQQSFFLAGKV----------QDILQVSQDEFHRITKINLTAPWFLLKAVATRMKDHGSGGSIVF 174

  Fly   181 MAAEFKDEGISVNALWPRTAIHTAAIEMLTGPDSAKWSRKPEIMADAAYAI--LTREPRQSTGQ- 242
            ||.....|    .||:|             |.|:         .|..:.||  |.|....|.|: 
plant   175 MATIASGE----RALYP-------------GADA---------YASTSAAIHQLVRASAMSLGKH 213

  Fly   243 ----------FFVDDEVLESAGITDLTEYACFRENADKLMVD 274
                      ..:|||...|.|          |:.|.||:.|
plant   214 KIRVNMISRGLHLDDEYTASVG----------RDRAQKLVKD 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsdl2NP_651578.1 PRK08278 7..277 CDD:181349 63/302 (21%)
SCP2 306..408 CDD:442486
AT3G01980NP_001078090.1 FabG 21..287 CDD:440651 62/287 (22%)
Blue background indicates that the domain is not in the aligned region.

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