DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsdl2 and AT3G03980

DIOPT Version :10

Sequence 1:NP_651578.1 Gene:Hsdl2 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_187048.1 Gene:AT3G03980 / 819553 AraportID:AT3G03980 Length:270 Species:Arabidopsis thaliana


Alignment Length:234 Identity:72/234 - (30%)
Similarity:111/234 - (47%) Gaps:30/234 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LAGRTLFITGASRGIGKEIALKAARDGANIVV--AAKTAEPHPKLPGTI--YSAAEEIEKAGGKA 67
            ||||...:||:|||||:.||:..|..||.||:  .:|.|:.. ::...|  :...|||...|.:|
plant    14 LAGRVAIVTGSSRGIGRAIAIHLAELGARIVINYTSKAADAE-RVASEINDFPVREEITGKGPRA 77

  Fly    68 YPCVVDVRDEQQVRSAVEAAVAKF-GGIDIVINNASAI--SLTNTPDTDMKRYDLMHNINTRGTF 129
            .....:|.:..||:|..:||.:.| ..:.|::|:|..:  ......||.::.:|...::||:|.|
plant    78 IVVQANVSEPSQVKSMFDAAESAFEAPVHILVNSAGILDPKYPTIADTSVEDFDHTFSVNTKGAF 142

  Fly   130 LVSKVCLPYLKKSNHAHI--LNISPPLSMKPKWFGPHVAYTMAKYGMSMCVLGMAAEFKDEGISV 192
            |.||.....||:.....|  |..|...|:|| .||   ||..:|..:...|..:|.|.|..||:.
plant   143 LCSKEAANRLKQGGGGRIILLTSSQTRSLKP-GFG---AYAASKAAVETMVKILAKELKGTGITA 203

  Fly   193 NALWPRTAIHTAAIEMLTGPDSAKW---SRKPEIMADAA 228
            |.:.|             ||.:.:.   .:.||::...|
plant   204 NCVAP-------------GPIATEMFFDGKTPELVEKIA 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsdl2NP_651578.1 PRK08278 7..277 CDD:181349 72/234 (31%)
SCP2 306..408 CDD:442486
AT3G03980NP_187048.1 THN_reductase-like_SDR_c 14..270 CDD:187620 72/234 (31%)
Blue background indicates that the domain is not in the aligned region.

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