DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsdl2 and PECR

DIOPT Version :10

Sequence 1:NP_651578.1 Gene:Hsdl2 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_060911.2 Gene:PECR / 55825 HGNCID:18281 Length:303 Species:Homo sapiens


Alignment Length:259 Identity:60/259 - (23%)
Similarity:105/259 - (40%) Gaps:36/259 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GKLAGRTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEIE-----KAG 64
            |.|.|:...:||.:.||||.|..:....|:|:|:|::..|       .:.|||:|::     ...
Human    14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLE-------RLKSAADELQANLPPTKQ 71

  Fly    65 GKAYPCVVDVRDEQQVRSAVEAAVAKFGGIDIVINNASAISLTNTPDTDMKRYDLMHNINTRGTF 129
            .:..|...::|:|::|.:.|::.:..||.|:.::||.....|:.......|.:..:...|..|||
Human    72 ARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 136

  Fly   130 LVSKVCLPYLKKSNHAHILNISPPLSMKPKWFGPHVAYTMAKYGMSMCVLGMAAEFKDEGISVNA 194
            .:.|.......|.:...|:||..|..   ..|...|....|:.|:......:|.|:...||.:|.
Human   137 YMCKAVYSSWMKEHGGSIVNIIVPTK---AGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINC 198

  Fly   195 LWPRTAIHTAAIEMLTGPDSAKWSRK----------------PEIMADAAYAILTREPRQSTGQ 242
            :.|.......|:|     :...|.:.                ||.::.....:|:......|||
Human   199 VAPGVIYSQTAVE-----NYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQ 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsdl2NP_651578.1 PRK08278 7..277 CDD:181349 59/257 (23%)
SCP2 306..408 CDD:442486
PECRNP_060911.2 TER_DECR_SDR_a 16..267 CDD:187627 59/257 (23%)
Microbody targeting signal 301..303
Blue background indicates that the domain is not in the aligned region.

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