DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsdl2 and CG31546

DIOPT Version :10

Sequence 1:NP_651578.1 Gene:Hsdl2 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_730973.1 Gene:CG31546 / 40691 FlyBaseID:FBgn0051546 Length:264 Species:Drosophila melanogaster


Alignment Length:316 Identity:69/316 - (21%)
Similarity:116/316 - (36%) Gaps:75/316 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MINTGK----LAGRTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEIE 61
            |.:.||    .:|:.:.||||:.|||...|...::.||.:.:..:..|      |.| ...:...
  Fly     1 MGSKGKAGLDFSGKVVLITGAASGIGAAAAEMFSKLGACLALVDREEE------GLI-CVMKRCM 58

  Fly    62 KAGGKAYPCVVDVRDEQQVRSAVEAAVAKF-GGIDIVINNASAISLTNTPDTDMKRYDLMHNINT 125
            |.|.:.|....|:....::.........:: |.:|:::|.|..:.......|::..:..:...|.
  Fly    59 KMGHEPYGIAGDLLKPPEIECIARKTTERYEGKLDVLVNGAGIMPTGTLQSTELACFTHVMEANV 123

  Fly   126 RGTFLVSKVCLPYLKKSNHAHILNISPPLSMKPKWFGPHVAYTMAKYGMSMCVLGMAAEFKDEGI 190
            |..|.::|:.||.|.:.. ..|:|:|....::.  |...|||.|:|..:......:|.:...:|:
  Fly   124 RSGFYLTKLLLPQLLQCK-GSIVNVSSVCGLRA--FPNLVAYNMSKAAVDQFTRSLALDLGPQGV 185

  Fly   191 SVNALWPRTAIHTAAIEMLTGPDSAKWSRKPEIMADAAYAILTREPRQSTGQFFVDDEVLESAGI 255
            .|||:.|.                               .|.|.               |:.||.
  Fly   186 RVNAVNPG-------------------------------VIRTN---------------LQKAGG 204

  Fly   256 TDLTEYACFRENADKLMVDFFVEEKGAPVENEAA----AEDAAA-------PASGG 300
            .|...||.|.|::.|...   :...|.|.|..||    |.:.|:       |..||
  Fly   205 MDEQSYAEFLEHSKKTHA---LGRIGEPKEVAAAICFLASELASFVTGVTLPVDGG 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsdl2NP_651578.1 PRK08278 7..277 CDD:181349 56/270 (21%)
SCP2 306..408 CDD:442486
CG31546NP_730973.1 Rossmann-fold NAD(P)(+)-binding proteins 11..261 CDD:473865 66/306 (22%)
Blue background indicates that the domain is not in the aligned region.

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