DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsdl2 and dhs-6

DIOPT Version :10

Sequence 1:NP_651578.1 Gene:Hsdl2 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_001021972.1 Gene:dhs-6 / 3565470 WormBaseID:WBGene00000970 Length:418 Species:Caenorhabditis elegans


Alignment Length:417 Identity:231/417 - (55%)
Similarity:291/417 - (69%) Gaps:17/417 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MINTGKLAGRTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEIEKAGG 65
            |.||||..|||:.|||||||||||||||.|:||||||||||||..||||||||||||||||||||
 Worm     1 MFNTGKFVGRTVLITGASRGIGKEIALKLAKDGANIVVAAKTATAHPKLPGTIYSAAEEIEKAGG 65

  Fly    66 KAYPCVVDVRDEQQVRSAVEAAVAKFGGIDIVINNASAISLTNTPDTDMKRYDLMHNINTRGTFL 130
            ||.||:||||||..|:::||.||.|||||||:||||||||||:|.:|:||||||||:||||||||
 Worm    66 KALPCIVDVRDEASVKASVEEAVKKFGGIDILINNASAISLTDTENTEMKRYDLMHSINTRGTFL 130

  Fly   131 VSKVCLPYLKKSNHAHILNISPPLSMKPKWFGPHVAYTMAKYGMSMCVLGMAAEFKDEGISVNAL 195
            ::|.||||||...:.|:|||||||.|:.:||..|||||||||||||||||...||:..||:||||
 Worm   131 MTKTCLPYLKSGKNPHVLNISPPLLMETRWFANHVAYTMAKYGMSMCVLGQHEEFRPHGIAVNAL 195

  Fly   196 WPRTAIHTAAIEMLTGPDSAKWSRKPEIMADAAYAILTREPRQSTGQFFVDDEVLESAGITDLTE 260
            ||.|||.|||:|||:.......||||.||||||||:|::..:..||.|.:|:::|::.|:||...
 Worm   196 WPLTAIWTAAMEMLSDKGGEAGSRKPSIMADAAYAVLSKNSKDFTGNFCIDEDILKAEGVTDFDR 260

  Fly   261 YACFRENADKLMVDFFVE--------EKGAPVENEAAAEDAAAPASGGDVKIPQLFRKIESLLSP 317
            |||..:  ..||.|||:.        ..||.:..:....:|...    :.:|.|:|...:.||:.
 Worm   261 YACVPD--APLMPDFFIPAGTYDHKFSSGAQIGKKNKTHEAGVV----EEEIKQIFTSAKRLLNA 319

  Fly   318 EIVSKTQAVFQFNI---SGAEQGTWFLDLKNGSGSCGAGTPTAAPDATLTMNSKNFFDMFSGKLK 379
            :||.||..|::|.:   :...:....||||||.|:......:...|...|:..::|..:|:|||:
 Worm   320 DIVKKTGFVYEFLLKDPTTKSERIITLDLKNGEGALTDKKASGKADVKFTLAPEHFAPLFTGKLR 384

  Fly   380 AAPAYMTGKLKISGDFQKALKLEKLMK 406
            ...|.||.||:||||...|:|||.|::
 Worm   385 PTTALMTKKLQISGDMPGAMKLESLLR 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsdl2NP_651578.1 PRK08278 7..277 CDD:181349 183/269 (68%)
SCP2 306..408 CDD:442486 38/104 (37%)
dhs-6NP_001021972.1 PRK08278 9..275 CDD:181349 183/267 (69%)
SCP2 318..411 CDD:460423 34/92 (37%)

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