DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5590 and hsdl2

DIOPT Version :9

Sequence 1:NP_651578.1 Gene:CG5590 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_955893.1 Gene:hsdl2 / 322347 ZFINID:ZDB-GENE-030131-1066 Length:415 Species:Danio rerio


Alignment Length:418 Identity:238/418 - (56%)
Similarity:300/418 - (71%) Gaps:14/418 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NTGKLAGRTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEIEKAGGKA 67
            |||||||.|:|||||||||||.||||||:||||:|:|||||:||||||||||:||.|||.|||||
Zfish     4 NTGKLAGCTIFITGASRGIGKAIALKAAQDGANVVIAAKTADPHPKLPGTIYTAAAEIEAAGGKA 68

  Fly    68 YPCVVDVRDEQQVRSAVEAAVAKFGGIDIVINNASAISLTNTPDTDMKRYDLMHNINTRGTFLVS 132
            .||:||||||:|:..|||.||.|||||||::||||||:||.|..|.||:.|||..||.|||:|.|
Zfish    69 LPCIVDVRDEKQINDAVEQAVEKFGGIDILVNNASAINLTGTLQTPMKKADLMLGINLRGTYLTS 133

  Fly   133 KVCLPYLKKSNHAHILNISPPLSMKPKWFGPHVAYTMAKYGMSMCVLGMAAEFKDEGISVNALWP 197
            |:|:|:|.||.:.||||:||||::.|.||..|.|||:|||||||||||||.||:. .|:||||||
Zfish   134 KLCIPHLLKSKNPHILNLSPPLNLNPIWFKNHTAYTIAKYGMSMCVLGMAEEFRG-SIAVNALWP 197

  Fly   198 RTAIHTAAIEMLTGPDSAKWSRKPEIMADAAYAILTREPRQSTGQFFVDDEVLESAGITDLTEYA 262
            :|||.|||::||.|.:..|..||.||||||||||. ::|...||||.:|:::|:..||.|...||
Zfish   198 KTAIQTAAMDMLGGSEVGKQCRKVEIMADAAYAIF-KQPTSFTGQFVIDEDILKKEGIKDFDVYA 261

  Fly   263 CFRENADKLMVDFFVEEKGAPVENEAAAEDA--------AAPASGGDVKIPQLFRKIESLLSPEI 319
            .  |....|:.|||::.:...:.....|..|        |.|.:.|.|.  ::|..|..::|||:
Zfish   262 V--EPGHPLLPDFFLDGQPEDLVKHMEAHGATPAFTTAKADPVAAGPVS--EMFNTIRGIISPEM 322

  Fly   320 VSKTQAVFQFNISGAEQGTWFLDLKNGSGSCGAGTPTAAPDATLTMNSKNFFDMFSGKLKAAPAY 384
            |..||.|::||::|...|.|:|||||.:||.|.|.|....|..::|:|::|..||.||||...|:
Zfish   323 VKTTQGVYKFNLAGEHAGVWYLDLKNDAGSAGNGEPPVKADVVMSMDSEDFVKMFGGKLKPTMAF 387

  Fly   385 MTGKLKISGDFQKALKLEKLMKALKSKL 412
            |:|||.|.||...|:||||:|..:||||
Zfish   388 MSGKLTIKGDMGLAIKLEKMMAMMKSKL 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5590NP_651578.1 FabG 5..245 CDD:223959 166/239 (69%)
PRK08278 7..277 CDD:181349 175/269 (65%)
SCP2 317..406 CDD:280250 44/88 (50%)
hsdl2NP_955893.1 HSDL2_SDR_c 8..248 CDD:187663 165/241 (68%)
adh_short 12..210 CDD:278532 141/198 (71%)
SCP2 311..408 CDD:280250 47/96 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580484
Domainoid 1 1.000 276 1.000 Domainoid score I1711
eggNOG 1 0.900 - - E1_KOG4170
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H75204
Inparanoid 1 1.050 459 1.000 Inparanoid score I1543
OMA 1 1.010 - - QHG63699
OrthoDB 1 1.010 - - D1361949at2759
OrthoFinder 1 1.000 - - FOG0005600
OrthoInspector 1 1.000 - - oto40812
orthoMCL 1 0.900 - - OOG6_103987
Panther 1 1.100 - - LDO PTHR42808
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5337
SonicParanoid 1 1.000 - - X4574
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

Return to query results.
Submit another query.