DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsdl2 and CG9360

DIOPT Version :10

Sequence 1:NP_651578.1 Gene:Hsdl2 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_572746.1 Gene:CG9360 / 32128 FlyBaseID:FBgn0030332 Length:251 Species:Drosophila melanogaster


Alignment Length:244 Identity:62/244 - (25%)
Similarity:101/244 - (41%) Gaps:37/244 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEIEKAGGKAYPCVVDV 74
            |...:||||.|||..........|..:|..|:..:...:|..::  .|::..:..|:  .|  ||
  Fly     7 RVAVVTGASSGIGAACCKDLVSKGLVVVGLARREDRLQELKASL--PADQASRFHGR--KC--DV 65

  Fly    75 RDEQQVRSAVEAAVAKFGGIDIVINNASAISLTNTPDTDMKRYDL--MHNINTRGTFLVSKVCLP 137
            ..||:|..|.....|..||.|:::|||..:.|......:....||  :.:.|..|....::....
  Fly    66 SQEQEVIDAFAWIDATLGGADVLVNNAGIVRLGVGITHEGNGADLRAILDTNVLGVSWCTREAFK 130

  Fly   138 YLKKS--NHAHILNI----------SPPLSMKPKWFGPHVAYTMAKYGMSMCVLGMAAEFKDE-- 188
            .||:.  |..|||.:          :|.::|.        .|:.:||.::.....:..||.:.  
  Fly   131 SLKRRNVNDGHILIVNSVAGHRVINNPGITMG--------MYSPSKYAVTALTEVLRQEFHNNKT 187

  Fly   189 GISVNALWPRTAIHTAAI--EMLTG-PDSAKWSRKPEIMADA-AYAILT 233
            ...:.::.| .|:.|..|  |.|.| ||..  ..:.|.:||| :|.|.|
  Fly   188 QTKITSISP-GAVDTEIIDKEALVGIPDFP--MLRSEDVADAISYCIQT 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsdl2NP_651578.1 PRK08278 7..277 CDD:181349 62/244 (25%)
SCP2 306..408 CDD:442486
CG9360NP_572746.1 Rossmann-fold NAD(P)(+)-binding proteins 1..246 CDD:473865 62/244 (25%)
Blue background indicates that the domain is not in the aligned region.

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