DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5590 and Hsdl2

DIOPT Version :9

Sequence 1:NP_651578.1 Gene:CG5590 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_001020868.1 Gene:Hsdl2 / 313200 RGDID:1305387 Length:524 Species:Rattus norvegicus


Alignment Length:525 Identity:243/525 - (46%)
Similarity:300/525 - (57%) Gaps:119/525 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NTGKLAGRTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEIEKAGGKA 67
            |||||||.|:|||||||||||.||||||:||||||:||||.:.||||.||||:||||||.|||||
  Rat     4 NTGKLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTTQRHPKLLGTIYTAAEEIEAAGGKA 68

  Fly    68 YPCVVDVRDEQQVRSAVEAAVAKFGGIDIVINNASAISLTNTPDTDMKRYDLMHNINTRGTFLVS 132
            .|||||||||||:.||||.||.:||||||::|||||||||||.:|..||.|||.::|||||:|.|
  Rat    69 LPCVVDVRDEQQINSAVEKAVERFGGIDILVNNASAISLTNTLETPTKRVDLMMSVNTRGTYLTS 133

  Fly   133 KVCLPYLKKSNHAHILNISPPLSMKPKWFGPHVAYTMAKYGMSMCVLGMAAEFKDEGISVNALWP 197
            |.|:|:||||..|||||:||||::.|.||..|.|||:|||||||||||||.||:.| |:||||||
  Rat   134 KACIPFLKKSKVAHILNLSPPLNLNPMWFKQHCAYTIAKYGMSMCVLGMAEEFRGE-IAVNALWP 197

  Fly   198 RTAIHTAAIEMLTGPDSAKWSRKPEIMADAAYAILTREPRQSTGQFFVDDEVLESAGITDLTEYA 262
            ||||||||::||.|.......||.:|:|||||:|..| |:..||.|.:|:.:|:..||.|...||
  Rat   198 RTAIHTAAMDMLGGAGVESQCRKVDIIADAAYSIFKR-PKSFTGNFIIDENILKEEGIKDFDIYA 261

  Fly   263 CFRENADKLMVDFFVEEKGAPVENEAAAEDAAAPASGGDVKI----------------------- 304
            .  .....|:.|||::|....|..|..:.|.........:::                       
  Rat   262 I--TPGHPLLPDFFLDEHPDAVMEEKESYDPVPEVKEEKLQLQEQPQLQEQPQLQEKPQLQEQPQ 324

  Fly   305 --------------------------------------PQL------------------------ 307
                                                  |||                        
  Rat   325 LQEKPQLQEQPQLQEQPQLQEQPQQQPQLQEQPQLQEKPQLQEQPQQQEKPQPQQQPQQQPQQRP 389

  Fly   308 ------------------------------FRKIESLLSPEIVSKTQAVFQFNISGAEQGTWFLD 342
                                          ||.::..||.|:|..||||:||.:||.:.||||||
  Rat   390 QQRPQPQPQPQPLLQSVLPPKPHFGAVEETFRIVKDSLSDEVVRATQAVYQFELSGEDGGTWFLD 454

  Fly   343 LKNGSGSCGAGTPTAAPDATLTMNSKNFFDMFSGKLKAAPAYMTGKLKISGDFQKALKLEKLMKA 407
            ||:..|..|.|.|:...|..::|.:::|..|||||||...|:|:|||||.|:...|:||||||..
  Rat   455 LKSKGGKVGHGEPSDRADVVMSMATEDFVKMFSGKLKPTMAFMSGKLKIKGNIALAIKLEKLMTH 519

  Fly   408 LKSKL 412
            :.|:|
  Rat   520 MNSRL 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5590NP_651578.1 FabG 5..245 CDD:223959 170/239 (71%)
PRK08278 7..277 CDD:181349 178/269 (66%)
SCP2 317..406 CDD:280250 46/88 (52%)
Hsdl2NP_001020868.1 HSDL2_SDR_c 8..248 CDD:187663 169/241 (70%)
adh_short 12..197 CDD:278532 138/185 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..410 5/126 (4%)
SCP2 424..517 CDD:280250 47/92 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340676
Domainoid 1 1.000 284 1.000 Domainoid score I1558
eggNOG 1 0.900 - - E1_KOG4170
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H75204
Inparanoid 1 1.050 361 1.000 Inparanoid score I2130
OMA 1 1.010 - - QHG63699
OrthoDB 1 1.010 - - D1361949at2759
OrthoFinder 1 1.000 - - FOG0005600
OrthoInspector 1 1.000 - - oto98524
orthoMCL 1 0.900 - - OOG6_103987
Panther 1 1.100 - - LDO PTHR42808
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4574
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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