DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5590 and Scp2

DIOPT Version :9

Sequence 1:NP_651578.1 Gene:CG5590 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_612517.3 Gene:Scp2 / 25541 RGDID:3642 Length:547 Species:Rattus norvegicus


Alignment Length:140 Identity:48/140 - (34%)
Similarity:74/140 - (52%) Gaps:15/140 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 EAAA-----EDAAAPAS--GGDVKIPQLFRKIESLL---SPEIVSKTQAVFQFNIS---GAEQGT 338
            |||:     :.:|||.|  |...|...:|::||..|   ..|.|.|...:|.|.:.   |.::.|
  Rat   409 EAASSFRTHQISAAPTSSAGDGFKANLIFKEIEKKLEEEGEEFVKKIGGIFAFKVKDGPGGKEAT 473

  Fly   339 WFLDLKNGSGSCGAGTPTAAPDATLTMNSKNFFDMFSGKLKAAPAYMTGKLKISGDFQKALKLEK 403
            |.:|:|||.||....:...| |.|:||...:...:.:||:....|:..|||||:|:...|:||:.
  Rat   474 WVVDVKNGKGSVLPDSDKKA-DCTITMADSDLLALMTGKMNPQSAFFQGKLKIAGNMGLAMKLQS 537

  Fly   404 L-MKALKSKL 412
            | ::..|:||
  Rat   538 LQLQPDKAKL 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5590NP_651578.1 FabG 5..245 CDD:223959
PRK08278 7..277 CDD:181349
SCP2 317..406 CDD:280250 32/92 (35%)
Scp2NP_612517.3 PRK08256 12..404 CDD:181327
SCP2 452..538 CDD:396566 30/86 (35%)
Microbody targeting signal. /evidence=ECO:0000255 545..547 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4170
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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