DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5590 and F20G2.2

DIOPT Version :9

Sequence 1:NP_651578.1 Gene:CG5590 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_506407.1 Gene:F20G2.2 / 184743 WormBaseID:WBGene00008986 Length:249 Species:Caenorhabditis elegans


Alignment Length:234 Identity:59/234 - (25%)
Similarity:103/234 - (44%) Gaps:36/234 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LAGRTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEIEK-AGGKAYPC 70
            ::.::|.||||:||||..:..:..:.....::.|...:|         |.|||:.. ...:.:..
 Worm     1 MSPKSLLITGANRGIGLGLLKQFLKHKDIQIIIATCRDP---------SKAEELSNLKDSRLHIL 56

  Fly    71 VVDVRDEQQVRSAVEAAVAKF---GGIDIVINNASAISLTNTPDTDMKRYDLMHNINTR--GTFL 130
            .:|:..::.: |.:.|.|.|.   .|:.:::||| .|.|....:.:..|..|:..:.|.  .|.|
 Worm    57 PLDIDCDESI-SKLYAEVEKLVGEDGLTVLLNNA-GILLPYDVEGEKNRKTLIRQLETNSVSTAL 119

  Fly   131 VSKVCLPYLKKS-----------NHAHILNISPPLSMKPK----WFGPHVAYTMAKYGMSMCVLG 180
            :::..||.|||:           |.|.|:|||...:...|    :.||.|||.|:|..::.....
 Worm   120 ITQEFLPLLKKAAAKNGGDGYSINRAAIVNISSTAASVEKIDGTFNGPLVAYRMSKSALNSFAKS 184

  Fly   181 MAAEFKDEGISVNAL---WPRTAIHTAAIEMLTGPDSAK 216
            .:.:.....|.|.:.   |.:|.: ..|..||...|:.|
 Worm   185 CSIDLAKYHILVTSFCPGWVKTGM-GGANAMLEIEDATK 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5590NP_651578.1 FabG 5..245 CDD:223959 59/234 (25%)
PRK08278 7..277 CDD:181349 59/234 (25%)
SCP2 317..406 CDD:280250
F20G2.2NP_506407.1 carb_red_sniffer_like_SDR_c 7..248 CDD:187586 58/228 (25%)
adh_short 7..208 CDD:278532 53/211 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160155982
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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