DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5590 and F53C11.3

DIOPT Version :9

Sequence 1:NP_651578.1 Gene:CG5590 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_506413.1 Gene:F53C11.3 / 179872 WormBaseID:WBGene00009973 Length:313 Species:Caenorhabditis elegans


Alignment Length:199 Identity:55/199 - (27%)
Similarity:93/199 - (46%) Gaps:18/199 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GKLAGRTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEIEKA-GGKAY 68
            |.|.|:...:||...|:||.||...|..||::.:||:..:       .:...|:||..: ||...
 Worm    22 GSLNGKVALVTGGGTGLGKAIATTFAHLGASVAIAARRLD-------VLEKTADEIRSSTGGVCE 79

  Fly    69 PCVVDVRDEQQVRSAVEAAVAKFGGI-DIVINNASAISLTNTPDTDMKRYDLMHNINTRGTFLVS 132
            |..:||:|..:|..|.:|...|.|.. ||:||||:...:..|.......|..:.:|..:||..|:
 Worm    80 PFQMDVKDPAKVAKAFDAVEKKLGHTPDILINNAAGNFIMATERLSPNAYGTIIDIVLKGTLHVT 144

  Fly   133 ----KVCLPYLKKSNHAHILNISPPLSMKPKWFGPHVAYTMAKYGMSMCVLGMAAEFKDEGISVN 193
                :.|   :::...|.:|:|:...:.....|  .|...::|.|:......:|:|:...|:..|
 Worm   145 TELGRRC---IQQKRGASVLSITTLYAQSGAPF--VVPSAVSKAGVENMTKSLASEWAKHGLRFN 204

  Fly   194 ALWP 197
            |:.|
 Worm   205 AIAP 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5590NP_651578.1 FabG 5..245 CDD:223959 55/199 (28%)
PRK08278 7..277 CDD:181349 54/197 (27%)
SCP2 317..406 CDD:280250
F53C11.3NP_506413.1 TER_DECR_SDR_a 40..275 CDD:187627 48/181 (27%)
PRK07677 40..273 CDD:181077 48/181 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0725
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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