DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsdl2 and LOC1280798

DIOPT Version :10

Sequence 1:NP_651578.1 Gene:Hsdl2 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:XP_320665.5 Gene:LOC1280798 / 1280798 VectorBaseID:AGAMI1_011675 Length:257 Species:Anopheles gambiae


Alignment Length:275 Identity:71/275 - (25%)
Similarity:115/275 - (41%) Gaps:41/275 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GRTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEIEKAGGKAYP--CV 71
            |:.:.|||||.|||...|......||:.|:||:.   ..||.......|     |.|||.|  .|
Mosquito     5 GKVVLITGASSGIGASTAKYLTNLGASCVLAARN---EAKLAEVCKECA-----ALGKATPLTVV 61

  Fly    72 VDVRDEQQVRSAVEAAVAKFGGIDIVINNASAISLTNTPDTDMKRYDLMHNINTRGTFLVSKVCL 136
            .||.....:...::..:||:|.:|:::|||...:..:..:.|:.::|.:.:.|.|..|.::|:.|
Mosquito    62 TDVTKRADLERLLKLTIAKYGRLDVLVNNAGKGAGGSIEEADLDQFDDILDTNLRSVFALTKLAL 126

  Fly   137 PYLKKSNHAHILNISPPLSMKPKWFGPHVAYTMAKYGMSMCVLGMAAEFKDEGISVNALWPR--- 198
            |:|..:. .:|:|:|.......  |...::|.::|..:.......|.:...:|:.||::.|.   
Mosquito   127 PHLLAAK-GNIVNVSSVAGTNS--FHNALSYCVSKAALDQFTRCTALDLAAKGVRVNSVNPAVIV 188

  Fly   199 TAIHTAAIEMLTGPDSAKWSRKPEIMADAAYAILTR--EPRQSTGQFFVDDEVLESAGI------ 255
            |..|.|     .|            |.|.|||...:  |.....|:....:||..|...      
Mosquito   189 TNFHKA-----IG------------MEDEAYAAYLKHCETTHPLGRVGTGEEVAASIAFLACDAT 236

  Fly   256 TDLTEYACFRENADK 270
            ...|...|.|.:..|
Mosquito   237 ASFTTGTCLRVDGGK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsdl2NP_651578.1 PRK08278 7..277 CDD:181349 71/275 (26%)
SCP2 306..408 CDD:442486
LOC1280798XP_320665.5 None
Blue background indicates that the domain is not in the aligned region.

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