DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsdl2 and Pecr

DIOPT Version :10

Sequence 1:NP_651578.1 Gene:Hsdl2 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_076012.3 Gene:Pecr / 111175 MGIID:2148199 Length:303 Species:Mus musculus


Alignment Length:299 Identity:67/299 - (22%)
Similarity:118/299 - (39%) Gaps:46/299 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GKLAGRTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEI-------EK 62
            |.|..:...:||...||||.::.:....|.|:|:|::..:       .:.:|.:|:       ..
Mouse    14 GLLKNQVAVVTGGGTGIGKAVSRELLHLGCNVVIASRKLD-------RLTAAVDELRASLPPSSS 71

  Fly    63 AGGKAYPCVVDVRDEQQVRSAVEAAVAKFGGIDIVINNASAISLTNTPDTDMKRYDLMHNINTRG 127
            |...|..|  ::|.|::|.:.|::.:||:|.|:.::||.....:....|...|.:..:...|..|
Mouse    72 AEVSAIQC--NIRKEEEVSNLVKSTLAKYGKINFLVNNGGGQFMAPVEDITAKGWHAVIETNLTG 134

  Fly   128 TFLVSKVCLPYLKKSNHAHILNISPPLSMKPKWFGPHVAYT-MAKYGMSMCVLGMAAEFKDEGIS 191
            ||.:.|.......:.:...|:||   :.:....| |..|:| .|:.|:......||..:...|:.
Mouse   135 TFYMCKEVYNSWMREHGGSIVNI---IVLLNNGF-PTAAHTGAAREGVYNLTKSMALAWASSGVR 195

  Fly   192 VNALWPRTAIHTAAI-----------EMLTGPDSAKWSRKPEIMADAAYAILTREPRQSTGQ--- 242
            :|.:.|.|.....|:           ||......||....||.::.....:|:......|||   
Mouse   196 INCVAPGTIYSQTAVDNYGEMGQTLFEMAFDSIPAKRLGVPEEISPLVCFLLSPAASYITGQLIN 260

  Fly   243 -----------FFVDDEVLESAGITDLTEYACFRENADK 270
                       |.:.|......|..||:.....:|:..|
Mouse   261 VDGGQALYTHAFSIPDHDNWPVGAGDLSIVKRIKESFKK 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsdl2NP_651578.1 PRK08278 7..277 CDD:181349 66/297 (22%)
SCP2 306..408 CDD:442486
PecrNP_076012.3 TER_DECR_SDR_a 32..267 CDD:187627 53/247 (21%)
Microbody targeting signal. /evidence=ECO:0000250 301..303
Blue background indicates that the domain is not in the aligned region.

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