DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc1 and Cabp5

DIOPT Version :10

Sequence 1:NP_476639.1 Gene:Mlc1 / 43323 FlyBaseID:FBgn0002772 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001102377.1 Gene:Cabp5 / 365194 RGDID:1308108 Length:173 Species:Rattus norvegicus


Alignment Length:147 Identity:33/147 - (22%)
Similarity:66/147 - (44%) Gaps:11/147 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EVENVEFVFEVMGSPGEG-IDAVDLGDALRALNLNPTLALIEKLGGTKKRN-EKKIKLDEFLPIY 70
            |::.:...|.......:| |...|||:.:|.:...||...:.:||...:.| ..::..::|:.:.
  Rat    29 EIDELREAFLEFDKDRDGFISYKDLGNLMRTMGYMPTEMELTELGQQIRMNLGGRVDFEDFVELM 93

  Fly    71 SQVKKEKEQGC--YEDFIECLKLYDKEENGTMLLAELQHAL-LALGESLDDEQVETLFADCMDPE 132
            :.....:..|.  .::..:..|.:|...:|.:.|||||.|: ..|||.|...::    |:.:...
  Rat    94 TPKLLAETAGMIGVQEMRDAFKEFDANGDGEITLAELQQAMQRLLGEKLTPREI----AEVVQEA 154

  Fly   133 D--DEGFIPYSPFLARM 147
            |  .:|.:.:..|:..|
  Rat   155 DINGDGTVDFEEFVKMM 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc1NP_476639.1 PTZ00184 1..150 CDD:185504 33/147 (22%)
Cabp5NP_001102377.1 PTZ00184 25..171 CDD:185504 32/145 (22%)

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