DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc1 and LOC100493285

DIOPT Version :9

Sequence 1:NP_001287569.1 Gene:Mlc1 / 43323 FlyBaseID:FBgn0002772 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_002936019.3 Gene:LOC100493285 / 100493285 -ID:- Length:214 Species:Xenopus tropicalis


Alignment Length:158 Identity:29/158 - (18%)
Similarity:65/158 - (41%) Gaps:32/158 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KREVENVEFVFEVMGSPGEGIDAVDLGDALRALNLNPTLALIEKLGGT-KKRNEKKIK------- 62
            ::|.:.:..||:.:....:|.           ||.|...:.:|.:|.. .|..|:.||       
 Frog    69 EQESKELRLVFKCVDVNKKGF-----------LNANEVQSALELMGFVINKHGEEHIKKWMDLNK 122

  Fly    63 -------LDEFLPIYSQVKKEKEQGCYEDFIECLKLYDKEENGTMLLAELQHALLALGESLDDEQ 120
                   ..|.:..:..|.::    .|.:..:...|.|::::|.:.:::|..|....|..|..::
 Frog   123 GSLGFCGFQELVADWHGVTRD----FYNELKKGFSLIDQDKDGKISMSDLNAASKMAGIHLSRQE 183

  Fly   121 VETLFADCMDPEDDEGFIPYSQFVQRLM 148
            :|.:.|:. |...|.. :..|:|::.::
 Frog   184 LEEMMAEA-DQNGDRA-VDISEFIEIML 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc1NP_001287569.1 PTZ00184 1..149 CDD:185504 29/158 (18%)
EFh 84..148 CDD:298682 13/63 (21%)
LOC100493285XP_002936019.3 PTZ00183 68..214 CDD:185503 29/158 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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