DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS10a and LOC100361240

DIOPT Version :9

Sequence 1:NP_651576.1 Gene:RpS10a / 43321 FlyBaseID:FBgn0027494 Length:163 Species:Drosophila melanogaster
Sequence 2:XP_038949995.1 Gene:LOC100361240 / 100361240 RGDID:2320523 Length:174 Species:Rattus norvegicus


Alignment Length:164 Identity:97/164 - (59%)
Similarity:114/164 - (69%) Gaps:10/164 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSEL-DK-IPNLQVIKVMQSLNSRGWVKEQFAWR 63
            |.:||.||:||||.||||||:|||||..:.||.|| || :|||.|:|.||||.|||:||||||||
  Rat     1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWR 65

  Fly    64 HFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGA-SKTDDDRSNY 127
            ||||.||||||:.||.||||||||||:|| :.:|....|||  |.||.|..... ::.:.||..|
  Rat    66 HFYWYLTNEGIQYLRDYLHLPPEIVPATL-RRSRPETGRPR--PKGPEGERPARFTRGEADRDTY 127

  Fly   128 RRGPGAYGMDKKGDVGAG----TGRVEYRGGFGR 157
            ||.....|.|||.:.|||    |...::||||||
  Rat   128 RRNAVPPGADKKAEAGAGSTTATTEFQFRGGFGR 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS10aNP_651576.1 S10_plectin 3..96 CDD:281497 69/94 (73%)
LOC100361240XP_038949995.1 S10_plectin 3..97 CDD:397530 69/94 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12146
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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