DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtl and rnd3a

DIOPT Version :9

Sequence 1:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_955816.1 Gene:rnd3a / 80963 ZFINID:ZDB-GENE-010319-40 Length:243 Species:Danio rerio


Alignment Length:194 Identity:79/194 - (40%)
Similarity:119/194 - (61%) Gaps:6/194 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTGRPIKC--VVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAG 63
            |...:.:||  |||||...|||.:|..:..||||..||||||:||:|..::|..::.|.||||:|
Zfish    16 MDPSQSLKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDKQRIELSLWDTSG 80

  Fly    64 QEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRET 128
            ...||.:||||||.:|..:||:.::.|.:.::|..||..||:..||:..::|||.|.|||.|..|
Zfish    81 SPYYDNVRPLSYPDSDAVIICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDLTT 145

  Fly   129 LSGLAEQGLTPLKREQGQKLANKIRAVKYMECSAL-TQRGLKPVFEEAVRAVLRP--EPLKRRQ 189
            |..|:....||:..:||..:|.:|.| .|:||||: ::..::.:|..|..|.:..  :.:||.:
Zfish   146 LVELSNHRQTPVSYDQGSAMAKQISA-PYIECSAVQSENSVRDIFHVATLACVNKNNKNIKRNK 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtlNP_524533.1 RHO 9..182 CDD:197554 75/175 (43%)
rnd3aNP_955816.1 Rnd3_RhoE_Rho8 19..197 CDD:206735 76/178 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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