DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtl and rac1l

DIOPT Version :9

Sequence 1:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_001332092.1 Gene:rac1l / 792699 ZFINID:ZDB-GENE-060315-6 Length:192 Species:Danio rerio


Alignment Length:188 Identity:110/188 - (58%)
Similarity:137/188 - (72%) Gaps:0/188 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDYDRLR 71
            :|||:|||..|.||.:|.||||......|||||||..|..:.||...|:||||||||||||..||
Zfish     4 VKCVLVGDAAVEKTALLFSYTTGKCQDGYVPTVFDKLSVDLVVDGNPVALGLWDTAGQEDYTILR 68

  Fly    72 PLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGLAEQG 136
            |||||.|||||:|:|...|.|||||:.||.||::||||:.||:|||||:||:.|:||:..|.|:.
Zfish    69 PLSYPNTDVFLVCFSCVGPQSFENVSEKWLPEVRHHCPNTPIVLVGTKLDLKNDKETIEHLKEKK 133

  Fly   137 LTPLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVLRPEPLKRRQRKCLI 194
            .||:...:|...|.:|.||||:||||.|.:|:|.||:||:||||.|:....|:|||||
Zfish   134 QTPISFHRGLAKAEEIGAVKYLECSAKTLKGVKTVFDEAIRAVLNPQEENIRKRKCLI 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtlNP_524533.1 RHO 9..182 CDD:197554 102/172 (59%)
rac1lXP_001332092.1 P-loop_NTPase 3..176 CDD:304359 100/171 (58%)
RHO 6..179 CDD:197554 102/172 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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