DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtl and rnd1b

DIOPT Version :9

Sequence 1:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001037861.1 Gene:rnd1b / 553414 ZFINID:ZDB-GENE-060315-7 Length:232 Species:Danio rerio


Alignment Length:194 Identity:81/194 - (41%)
Similarity:113/194 - (58%) Gaps:8/194 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDYDRLRP 72
            |.|:|||...|||.||.....||:|..||||||:||:|.:::|..:|.|.||||:|...||.:||
Zfish    15 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLELDDQRVELSLWDTSGSPYYDNVRP 79

  Fly    73 LSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGLAEQGL 137
            |.|..:|..|:|:.::.|..|::...||..||...||...|:|||.|.|||.|..||..|:.|..
Zfish    80 LCYSDSDAVLLCFDISRPDIFDSGLKKWRAEILDFCPSTRILLVGCKTDLRTDVCTLMELSNQKQ 144

  Fly   138 TPLKREQGQKLANKIRAVKYMECSALT-QRGLKPVFEEAVRAVL-------RPEPLKRRQRKCL 193
            ||:..|||..:|.::.|..|:||||.| ::.:..||..|..|.:       :|.|.:|..::.|
Zfish   145 TPITHEQGSAMAKQLGAEAYLECSAFTSEKSIHSVFRTAALACINKLQPLAKPSPTRRLSKRLL 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtlNP_524533.1 RHO 9..182 CDD:197554 76/180 (42%)
rnd1bNP_001037861.1 Rnd1_Rho6 1..232 CDD:206737 81/194 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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