DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtl and rhoub

DIOPT Version :9

Sequence 1:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001017784.2 Gene:rhoub / 550481 ZFINID:ZDB-GENE-050417-308 Length:237 Species:Danio rerio


Alignment Length:189 Identity:98/189 - (51%)
Similarity:135/189 - (71%) Gaps:1/189 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GRPIKCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDYD 68
            ||.:|||.:|||.||||.:::||||:.:|.:||||.||::||.:|||...|.|.|.|||||:::|
Zfish    26 GRLLKCVFLGDGAVGKTSLIVSYTTNGYPTKYVPTAFDDFSAVVQVDGQPVRLQLCDTAGQDEFD 90

  Fly    69 RLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGLA 133
            :||...|.:|||.|:|:||.||:||:|:..||.|||:..||..|:|||||:.|||:|.:.|..||
Zfish    91 KLRHFCYTRTDVLLLCFSVVSPASFQNIGEKWVPEIRRRCPLTPVILVGTQCDLRQDVKVLIDLA 155

  Fly   134 EQGLTPLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVLRPEPLK-RRQRK 191
            .:...|:..|..:.||:||.||.|:|||:|||:.||.||:.|:...||....: ||:||
Zfish   156 RRRERPVLEEDARALADKIGAVSYIECSSLTQKNLKEVFDAAISVGLRHSDRRARRERK 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtlNP_524533.1 RHO 9..182 CDD:197554 90/172 (52%)
rhoubNP_001017784.2 Wrch_1 29..198 CDD:133330 89/168 (53%)
RHO 31..202 CDD:197554 89/170 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 1 1.000 - - FOG0000070
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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