DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mtl and rhoua

DIOPT Version :9

Sequence 1:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001007444.1 Gene:rhoua / 492802 ZFINID:ZDB-GENE-040618-3 Length:254 Species:Danio rerio


Alignment Length:186 Identity:99/186 - (53%)
Similarity:136/186 - (73%) Gaps:0/186 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RPIKCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDYDR 69
            |.:|||:||||.||||.:::||||:.:|.|||||.|||::|.:.||...|.|.|.|||||:::|:
Zfish    45 RRVKCVLVGDGAVGKTSLIVSYTTNGYPTEYVPTAFDNFAAVVAVDGKPVKLQLCDTAGQDEFDK 109

  Fly    70 LRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGLAE 134
            ||||.|...||||:|:||.|||||:||..||.|||:.|||.|||:||||:.|||||.:.|..||:
Zfish   110 LRPLCYTNADVFLLCFSVVSPSSFQNVREKWVPEIRRHCPRAPILLVGTQSDLREDVKVLIQLAQ 174

  Fly   135 QGLTPLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVLRPEPLKRRQR 190
            ....|::.:.....|.:::||.|||||||||:.||.||:.|:.|.::....::::|
Zfish   175 YKERPVEPQDASVCAEEVQAVSYMECSALTQKNLKEVFDTAIVASIQYSDSQQQKR 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtlNP_524533.1 RHO 9..182 CDD:197554 96/172 (56%)
rhouaNP_001007444.1 Wrch_1 47..219 CDD:133330 96/171 (56%)
RHO 49..221 CDD:197554 96/171 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 1 1.000 - - FOG0000070
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.