DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtl and Rhod

DIOPT Version :10

Sequence 1:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001099793.1 Gene:Rhod / 293660 RGDID:1310985 Length:210 Species:Rattus norvegicus


Alignment Length:196 Identity:89/196 - (45%)
Similarity:128/196 - (65%) Gaps:4/196 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TGRPIKCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDY 67
            :|||||.|:||||..|||.:::.:....||..|.||||:.|:|.:|:....|.|.:||||||:||
  Rat    14 SGRPIKVVLVGDGGCGKTSLMMVFANGAFPESYNPTVFERYNATLQMKGKPVRLQIWDTAGQDDY 78

  Fly    68 DRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGL 132
            ||||||.||..:|.|:|:.|.:|:||:||:::||||:.|.|...|||:||.|||||:|:..::.|
  Rat    79 DRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLRKDKVLVNTL 143

  Fly   133 AEQGLTPLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVL--RPEPLKRR--QRKCL 193
            .::.|.|:...:|..:|..:.||.|:||||.....::.||:||....|  |.....||  |..|:
  Rat   144 RKKRLEPVTYHRGHDMARSVGAVAYLECSARLHDNVEAVFQEAAEVALSSRSHNFWRRITQNFCV 208

  Fly   194 I 194
            :
  Rat   209 V 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtlNP_524533.1 RHO 9..182 CDD:197554 79/174 (45%)
RhodNP_001099793.1 Rho4_like 16..210 CDD:206704 88/194 (45%)

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