DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtl and mig-2

DIOPT Version :9

Sequence 1:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_509931.1 Gene:mig-2 / 181344 WormBaseID:WBGene00003239 Length:195 Species:Caenorhabditis elegans


Alignment Length:194 Identity:133/194 - (68%)
Similarity:161/194 - (82%) Gaps:1/194 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STGRPIKCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQED 66
            |..|.|||||||||||||||||||||||.||.:|||||||||||.|.:|...|:|||||||||||
 Worm     3 SPSRQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQED 67

  Fly    67 YDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSG 131
            |||||||||||||||::|:||.||.||:||.|||.|||:.||||||:||||||:|||::.|.:..
 Worm    68 YDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILVGTKLDLRDEAEPMRA 132

  Fly   132 LAEQGLTPLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVLRPEPLKRRQRKCLIM 195
            |..:|.:|:.:.||.|:|.||:||||:|||||||:||..|||:|||::|.|:|.|:: :.|.||
 Worm   133 LQAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILHPKPQKKK-KSCNIM 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtlNP_524533.1 RHO 9..182 CDD:197554 123/172 (72%)
mig-2NP_509931.1 Rho 8..178 CDD:206641 122/169 (72%)
RHO 10..183 CDD:197554 123/172 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128946
Inparanoid 1 1.050 283 1.000 Inparanoid score I1735
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 1 1.000 - - FOG0000070
OrthoInspector 1 1.000 - - oto17183
orthoMCL 1 0.900 - - OOG6_100633
Panther 1 1.100 - - LDO PTHR24072
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16964
SonicParanoid 1 1.000 - - X103
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.860

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