DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtl and Rhov

DIOPT Version :10

Sequence 1:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_038960142.1 Gene:Rhov / 171581 RGDID:628824 Length:281 Species:Rattus norvegicus


Alignment Length:186 Identity:98/186 - (52%)
Similarity:127/186 - (68%) Gaps:3/186 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDYDRLR 71
            ||||:||||.|||:.:::|||.:.:|..|.||..|.:|..:.||...|.:.|||||||||:||||
  Rat    77 IKCVLVGDGAVGKSSLIVSYTCNGYPSRYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLR 141

  Fly    72 PLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGLAEQG 136
            .|.||.|||||.|:||..||||:|:|.||.|||:.|.|.||::||||:.|||:|...|..|.:.|
  Rat   142 SLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGG 206

  Fly   137 LT-PLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVLRPEPLKRRQRK 191
            .. |:...|.|.||.||||..|:|||||||:.||.||:.|:.:.:  |...|.::|
  Rat   207 REGPVPEPQAQGLAEKIRACCYLECSALTQKNLKEVFDSAILSAI--EHKARLEKK 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtlNP_524533.1 RHO 9..182 CDD:197554 93/173 (54%)
RhovXP_038960142.1 Wrch_1 77..250 CDD:133330 95/172 (55%)

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