DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtl and Rhod

DIOPT Version :10

Sequence 1:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_031511.1 Gene:Rhod / 11854 MGIID:108446 Length:210 Species:Mus musculus


Alignment Length:195 Identity:87/195 - (44%)
Similarity:125/195 - (64%) Gaps:4/195 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TGRPIKCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDY 67
            :|..:|.|:||||..|||.:::.:....||..|.||||:.|:|.:|:....|.|.:||||||:||
Mouse    14 SGHSVKVVLVGDGGCGKTSLMMVFAKGAFPESYSPTVFERYNATLQMKGKPVHLQIWDTAGQDDY 78

  Fly    68 DRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGL 132
            ||||||.||..:|.|:|:.|.:|:||:||:::||||:.|.|...|||:||.|||||:|:..::.|
Mouse    79 DRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLRKDKVLVNNL 143

  Fly   133 AEQGLTPLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVL--RPEPLKRR--QRKCL 193
            .::.|.|:...:|..:|..:.||.|:||||.....::.||:||....|  |.....||  |..||
Mouse   144 RKKRLEPVTYHRGHDMARSVGAVAYLECSARLHDNVEAVFQEAAEVALSSRRHNFWRRITQNCCL 208

  Fly   194  193
            Mouse   209  208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtlNP_524533.1 RHO 9..182 CDD:197554 79/174 (45%)
RhodNP_031511.1 Rho4_like 17..208 CDD:206704 84/190 (44%)
Effector region. /evidence=ECO:0000255 46..54 5/7 (71%)

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