DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtl and rhoq

DIOPT Version :9

Sequence 1:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_031757763.1 Gene:rhoq / 100497782 XenbaseID:XB-GENE-492072 Length:205 Species:Xenopus tropicalis


Alignment Length:190 Identity:110/190 - (57%)
Similarity:144/190 - (75%) Gaps:3/190 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDYDRLR 71
            :||||||||.|||||:|:||..|.||.||||||||:|:..:.|...|..|||:||||||||||||
 Frog    10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGRQYLLGLYDTAGQEDYDRLR 74

  Fly    72 PLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGLAEQG 136
            |||||.|||||||:||.:|:||:||..:|.||:|.:.|:.|.:||||:||||:|.:||:.|.:..
 Frog    75 PLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLVGTQIDLRDDPKTLAKLNDVK 139

  Fly   137 LTPLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVLRPEPLKRRQR---KCL 193
            ..|:..|||.|||.:|.|..|:|||||||:|||.||:|::.|:|.|:....::|   :|:
 Frog   140 EKPITVEQGHKLAKEIGACCYVECSALTQKGLKTVFDESIIAILTPKKTAMKKRLGSRCI 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtlNP_524533.1 RHO 9..182 CDD:197554 106/172 (62%)
rhoqXP_031757763.1 Tc10 10..183 CDD:206707 106/172 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 1 1.000 - - FOG0000070
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X103
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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