DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtl and rhov

DIOPT Version :9

Sequence 1:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001012250.1 Gene:rhov / 100005849 ZFINID:ZDB-GENE-031002-10 Length:235 Species:Danio rerio


Alignment Length:185 Identity:89/185 - (48%)
Similarity:126/185 - (68%) Gaps:0/185 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDYDRLR 71
            |.|::||||.||||.|::||||:.:|.:|..|.||.:|..:|||...|.:.|.||||||::|..|
Zfish    30 ISCMLVGDGAVGKTSMIVSYTTNGYPTDYKQTAFDVFSGQVQVDGTPVRIQLMDTAGQEEFDEFR 94

  Fly    72 PLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGLAEQG 136
            .|||..|||||:|:||.:|:||:|:|.||.|||:...|.:|||||||:.||..|...|..|....
Zfish    95 SLSYAHTDVFLLCFSVVNPTSFQNITKKWIPEIRECNPSSPIILVGTQSDLVLDVNVLIDLDRYK 159

  Fly   137 LTPLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVLRPEPLKRRQRK 191
            :.|:...:.:.|:.||||.:|:|||||||:.||..|:.|:.|.::.:..|.::|:
Zfish   160 VKPVCSSRARSLSEKIRAAEYVECSALTQKNLKEAFDAAIFAAIKHKARKAKKRR 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtlNP_524533.1 RHO 9..182 CDD:197554 86/172 (50%)
rhovNP_001012250.1 Wrch_1 30..193 CDD:133330 83/162 (51%)
RHO 32..193 CDD:197554 82/160 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 1 1.000 - - FOG0000070
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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