DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5611 and Echdc2

DIOPT Version :10

Sequence 1:NP_651574.1 Gene:CG5611 / 43318 FlyBaseID:FBgn0039531 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001100145.1 Gene:Echdc2 / 298381 RGDID:1308525 Length:296 Species:Rattus norvegicus


Alignment Length:294 Identity:90/294 - (30%)
Similarity:136/294 - (46%) Gaps:36/294 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GCRRISLATVRNAESESQEGAPARTVLVEKDSHITLIGLNREQQRNSIDANTAEQLTEAISQFEA 82
            ||  .:.|:.|..|.:.|       .|...:..||.|.:||...||::......:|.||::|...
  Rat    22 GC--AAHASTRTPEIQVQ-------ALTGPNQGITEILMNRPHARNALGNVFVSELLEALAQLRE 77

  Fly    83 DDTSPVGVLY--GIGGSFCAGYDLEELE--AEAQRGSLNFLLRHEGSVGPTRRHLRKPLVCGISG 143
            |....| :|:  .:.|.||||.||:|.|  :.|:.|:  |:.|..|.:..... ...|.:..:.|
  Rat    78 DQQVRV-LLFRSAVKGVFCAGADLKERERMSAAEVGT--FVQRLRGLMSEIAA-FPAPTIAAMDG 138

  Fly   144 FCVAGGLELALMCDLRVMEDTAVLGFFNRRLGVPLSDGGTVRLAAAVGYSNALEIIATGRRIYSG 208
            |.:.|||||||.||||:...:||:|......|:....|||.||...:|.:.|.|:|.||||:...
  Rat   139 FALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLNGV 203

  Fly   209 EARRIGLVNRVVATGTALGQAVNLAFSIAK--FPMA-------SLMHDRNAVLENANAYNKPGFH 264
            :|..:||||..||.......|.:.|.::|:  .|.|       .:..||...::.|:     |..
  Rat   204 QAHELGLVNHAVAQNEEGDAAYHRALALAQEILPQAPIAVRLGKVAIDRGMEVDIAS-----GMA 263

  Fly   265 VASYNEIMNVTSDMITDMQEGVKRFKNSEIKGPK 298
            :.......|:.:.   |..||:..|:  |.:.||
  Rat   264 IEHMCYAQNIPTQ---DRLEGMAAFR--EKRPPK 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5611NP_651574.1 crotonase-like 39..256 CDD:474030 74/229 (32%)
Echdc2NP_001100145.1 crotonase-like 42..296 CDD:474030 83/265 (31%)

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