DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tusp and TLP7

DIOPT Version :9

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_564627.1 Gene:TLP7 / 841766 AraportID:AT1G53320 Length:379 Species:Arabidopsis thaliana


Alignment Length:389 Identity:96/389 - (24%)
Similarity:152/389 - (39%) Gaps:116/389 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1144 STPLLGRKQDNGFSFVKQLSEVRWRRKEQPAQAQVNGSSNASTLERQPQPEITGAACGTVEAT-- 1206
            |..||.|:..|.|.|.:..:......:..|..:.:.|||:.|.:    .||:.|.....||.|  
plant     4 SRSLLSRRISNSFRFHQGETTTAPESESIPPPSNMAGSSSWSAM----LPELLGEIIRRVEETED 64

  Fly  1207 ------PVEAKASVSLHTQALTTLENIISRLRDLDEGRLTPPSTPQRLPRSSP---ASPAASKKN 1262
                  .|...|.||...:.:|   :..:| ..|:.|::|.||. .:||  .|   ::....|:|
plant    65 RWPQRRDVVTCACVSKKWREIT---HDFAR-SSLNSGKITFPSC-LKLP--GPRDFSNQCLIKRN 122

  Fly  1263 KRQQSNSPIRHILNSP---------LLNRRQRK---KQSIIESSDDEGNQ--------------- 1300
            |:  :::...::..:|         |..||.|.   .:.||....|:.:|               
plant   123 KK--TSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISLDADDFSQGSNAYVGKLRSDFLG 185

  Fly  1301 TNGSGEES----NNA--GNGKQYRDLETFQKAQLRQKLKRGKIE---------------PNGSAS 1344
            ||.:..:|    |.|  .|||..|   .|...|:..::..|..|               |....|
plant   186 TNFTVYDSQPPHNGAKPSNGKASR---RFASKQISPQVPAGNFEVGHVSYKFNLLKSRGPRRMVS 247

  Fly  1345 ---CANPAPVRRE--------------------------FVMHNKAPMWNEMSQVYQLDFGGRVT 1380
               |.:|:|....                          .::.||||.|:|..|.:.|:|.||||
plant   248 TLRCPSPSPSSSSAGLSSDQKPCDVTKIMKKPNKDGSSLTILKNKAPRWHEHLQCWCLNFHGRVT 312

  Fly  1381 QESAKNFQI-------EFRGK-----QVMQFGRIDGNAYTLDFQYPFSALQAFAVALANVTQRL 1432
            ..|.||||:       :..||     .::|||::..:.:|:|::.|.||.||||:.|.:...:|
plant   313 VASVKNFQLVATVDQSQPSGKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKL 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 51..>295 CDD:225201
WD40 81..359 CDD:295369
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <588..>644 CDD:279506
Tub <1355..1426 CDD:279506 32/82 (39%)
TLP7NP_564627.1 F-box 42..89 CDD:395521 13/53 (25%)
Tub 108..374 CDD:395929 65/272 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16517
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.980

Return to query results.
Submit another query.