DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tusp and TUB

DIOPT Version :9

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_003311.2 Gene:TUB / 7275 HGNCID:12406 Length:561 Species:Homo sapiens


Alignment Length:578 Identity:138/578 - (23%)
Similarity:197/578 - (34%) Gaps:181/578 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   978 RKDAPNKRLILVDKKRNRRK-------------------RQQQEDARRHKLQQTGKSKSLDSCDL 1023
            ||..|.||....|::..|||                   |||:.|.:|..|:|..|.|..:.   
Human    39 RKPGPLKRGHRRDRRTTRRKYWKEGREIARVLDDEGRNLRQQKLDRQRALLEQKQKKKRQEP--- 100

  Fly  1024 LSLQTKLSSKEHEQVVRKLQEISD--SSACSSAANTLCFKCRNNMSPSSACKRCQPSASSVLDEI 1086
            |.:|.....:...:..|:.:|.:.  .|..||:.:|           |...:.....||..|...
Human   101 LMVQANADGRPRSRRARQSEEQAPLVESYLSSSGST-----------SYQVQEADSLASVQLGAT 154

  Fly  1087 TAVVPAVEPAKESPAV-----QAKPAPKKRFDVITSFTDSPLFTRKHR----------------- 1129
            ....||  .||.:.|.     |...|.|::             ..||:                 
Human   155 RPTAPA--SAKRTKAAATAGGQGGAARKEK-------------KGKHKGTSGPAALAEDKSEAQG 204

  Fly  1130 ----FGIGRSK------ETAGTENSTP----LLGRKQDNGFSFVKQLSEVRWRRKE-QPAQAQVN 1179
                ..:|:|.      |||......|    |....|..|.|......|.....:| ..:.:|:|
Human   205 PVQILTVGQSDHAQDAGETAAGGGERPSGQDLRATMQRKGISSSMSFDEDEEDEEENSSSSSQLN 269

  Fly  1180 GSSN-ASTLERQPQPEITGAACGTVEATPVEAKASVSLHTQALTTLENIISRLRDLDEGRLTPPS 1243
            .::. :|...|:...|...|...|....||:.:                   ::||:|..|.|  
Human   270 SNTRPSSATSRKSVREAASAPSPTAPEQPVDVE-------------------VQDLEEFALRP-- 313

  Fly  1244 TPQ------RLPRSSPASPAASKKNKRQQSNSPIRHILNSP-----LLNRRQRKKQSI------I 1291
            .||      |:.|.       .|...|....:...|:....     ||..|:|||...      :
Human   314 APQGITIKCRITRD-------KKGMDRGMYPTYFLHLDREDGKKVFLLAGRKRKKSKTSNYLISV 371

  Fly  1292 ESSD-DEGNQTNGSGEESNNAG-------NG--KQYRDLETFQKAQLRQKLKRGKIEPN-----G 1341
            :.:| ..|..:......||..|       ||  .|.....|.:...|||:|.....|.|     |
Human   372 DPTDLSRGGDSYIGKLRSNLMGTKFTVYDNGVNPQKASSSTLESGTLRQELAAVCYETNVLGFKG 436

  Fly  1342 SASCANPAP------------VRRE----------------FVMHNKAPMWNEMSQVYQLDFGGR 1378
            ....:...|            .|.|                ..:.||.|:||:.:|.|.|:|.||
Human   437 PRKMSVIVPGMNMVHERVSIRPRNEHETLLARWQNKNTESIIELQNKTPVWNDDTQSYVLNFHGR 501

  Fly  1379 VTQESAKNFQIEFRGKQ----VMQFGRIDGNAYTLDFQYPFSALQAFAVALANVTQRL 1432
            |||.|.||||| ..|..    ||||||:..:.:|:|:.||..||||||:||::...:|
Human   502 VTQASVKNFQI-IHGNDPDYIVMQFGRVAEDVFTMDYNYPLCALQAFAIALSSFDSKL 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 51..>295 CDD:225201
WD40 81..359 CDD:295369
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <588..>644 CDD:279506
Tub <1355..1426 CDD:279506 38/74 (51%)
TUBNP_003311.2 Tub_N 84..292 CDD:292938 45/236 (19%)
Tub 313..554 CDD:279506 72/250 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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