Sequence 1: | NP_001263014.1 | Gene: | Tusp / 43317 | FlyBaseID: | FBgn0039530 | Length: | 1433 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008761560.2 | Gene: | Tulp3 / 688749 | RGDID: | 1585259 | Length: | 503 | Species: | Rattus norvegicus |
Alignment Length: | 560 | Identity: | 130/560 - (23%) |
---|---|---|---|
Similarity: | 203/560 - (36%) | Gaps: | 189/560 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 957 CSVGYLDSVAITPSDEALSALRKDAPNKRLILVDKKRNRRKR------QQQEDARRHKLQQTGKS 1015
Fly 1016 KSLDSCDLLSLQTKLSSKEHEQVVRKLQEISDSSACSSAANTLCFKCRNNMSPSSACKRCQPSAS 1080
Fly 1081 SVLDEITA----VVPAVEPAKESP---AVQAKPAPKKRFDVITSFTDSPLFTRKHRFGIGRSKET 1138
Fly 1139 AGTENSTPLLGRKQDNGFSFVKQLSEVRWRRKEQPAQAQVNGSSNASTLERQPQPEITGAACGTV 1203
Fly 1204 EATPVEAKASVSLHTQALTTLEN--IISRLRDLDEGRLTPPSTPQRLPRSSPASPAASKKNK--- 1263
Fly 1264 -----------RQQSNSPIRHILNSPLLNRRQRKK---QSIIESSDD-----EGNQTNGSGEESN 1309
Fly 1310 NAG----------NGKQYRDLETFQKAQLRQKL----------------KRGKIEPNGSASCAN- 1347
Fly 1348 PAPVRRE----------------FVMHNKAPMWNEMSQVYQLDFGGRVTQESAKNFQIEFRGKQ- 1395
Fly 1396 ---VMQFGRIDGNAYTLDFQYPFSALQAFAVALANVTQRL 1432 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tusp | NP_001263014.1 | WD40 | 51..>295 | CDD:225201 | |
WD40 | 81..359 | CDD:295369 | |||
WD40 repeat | 91..126 | CDD:293791 | |||
WD40 repeat | 132..168 | CDD:293791 | |||
WD40 repeat | 173..208 | CDD:293791 | |||
WD40 repeat | 216..263 | CDD:293791 | |||
WD40 repeat | 270..333 | CDD:293791 | |||
Tub | <588..>644 | CDD:279506 | |||
Tub | <1355..1426 | CDD:279506 | 40/74 (54%) | ||
Tulp3 | XP_008761560.2 | Tub_N | 70..233 | CDD:406673 | 47/249 (19%) |
Tub | 255..498 | CDD:395929 | 74/258 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1445357at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |