DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and WDR35

DIOPT Version :9

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_001006658.1 Gene:WDR35 / 57539 HGNCID:29250 Length:1181 Species:Homo sapiens


Alignment Length:383 Identity:111/383 - (28%)
Similarity:175/383 - (45%) Gaps:73/383 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHLHFERNI----NTKCDCTILSLSWMGKVPDDIPEDEGWKLNRTNYYQEGWLATGNVRGIVGV- 60
            |..:..:.|    |.|..|    :||                |:    ::|::|.|...|::.| 
Human     1 MFFYLSKKISIPNNVKLQC----VSW----------------NK----EQGFIACGGEDGLLKVL 41

  Fly    61 ---TFTTSHCRKNMDYP--LRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVWIKYEGRWS 120
               |.|.....:.:..|  |..|..|.||...|.:|.|||.||||.:.|.:|:|.||:.|:|.|.
Human    42 KLETQTDDAKLRGLAAPSNLSMNQTLEGHSGSVQVVTWNEQYQKLTTSDENGLIIVWMLYKGSWI 106

  Fly   121 IELINDRNTPVTH-FSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLNLESTITCGI------W 178
            .|:||:||..|.. .||:.||:...|.|:||.|:||||.|.|.|...|.       ||      |
Human   107 EEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWGKDLK-------GIQLSHVTW 164

  Fly   179 TPDDQQVYFGTTQGQVIVMDVHGAMVSQVQLSNDVPITSMAWSCEKFKMEEGEE--AEPGVTNAA 241
            :.|.:.:.||...|::.:.|..|..:.:::||..|.:|. |.|........|.|  .||...   
Human   165 SADSKVLLFGMANGEIHIYDNQGNFMIKMKLSCLVNVTG-AISIAGIHWYHGTEGYVEPDCP--- 225

  Fly   242 KRSFVLAVSFQNGYIYLLKSFDDVSPAHINTCLNGALGMVMEWSNSRELLAVAGTLRTGVDGTKT 306
                .|||.|.||...:::..:|.:|..|:|   |...:.::|::...:|||||..:..:   :.
Human   226 ----CLAVCFDNGRCQIMRHENDQNPVLIDT---GMYVVGIQWNHMGSVLAVAGFQKAAM---QD 280

  Fly   307 EDMGTPSCYTNLVKFYTETGTCLYQAHIPCSSATVSAITWGHNDKRLFIATGTQVHIA 364
            :|:       |:|:|||..|..|....:|  ...:||::|.....::.:|..:.::.|
Human   281 KDV-------NIVQFYTPFGEHLGTLKVP--GKEISALSWEGGGLKIALAVDSFIYFA 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 51..>295 CDD:225201 85/258 (33%)
WD40 81..359 CDD:295369 92/286 (32%)
WD40 repeat 91..126 CDD:293791 18/34 (53%)
WD40 repeat 132..168 CDD:293791 16/36 (44%)
WD40 repeat 173..208 CDD:293791 9/40 (23%)
WD40 repeat 216..263 CDD:293791 13/48 (27%)
WD40 repeat 270..333 CDD:293791 17/62 (27%)
Tub <588..>644 CDD:279506
Tub <1355..1426 CDD:279506
WDR35NP_001006658.1 WD 1 4..43 12/62 (19%)
WD40 <5..192 CDD:225201 69/217 (32%)
WD40 repeat 17..69 CDD:293791 15/75 (20%)
WD40 <19..184 CDD:295369 64/195 (33%)
WD 2 61..100 19/38 (50%)
WD40 repeat 75..113 CDD:293791 19/37 (51%)
WD 3 105..143 17/37 (46%)
WD40 repeat 118..190 CDD:293791 26/78 (33%)
WD 4 147..185 10/44 (23%)
WD 5 193..241 16/55 (29%)
WD40 repeat 206..251 CDD:293791 13/51 (25%)
WD 6 246..288 13/54 (24%)
WD40 repeat 256..300 CDD:293791 14/53 (26%)
WD40 repeat 306..345 CDD:293791 5/24 (21%)
Clathrin <829..920 CDD:279031
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2041
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D91334at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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