DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and tulp3

DIOPT Version :9

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_005164515.1 Gene:tulp3 / 566221 ZFINID:ZDB-GENE-130530-714 Length:490 Species:Danio rerio


Alignment Length:618 Identity:135/618 - (21%)
Similarity:238/618 - (38%) Gaps:184/618 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   853 SY--SSNADYANNVVQVKNALMSEPVRSANSHVNPVPLNL-NLNLERMDARVKCTAPTTSSTAKR 914
            ||  ||::.:|:.|:              .|.:....||| ...||:..|.::     .....||
Zfish    16 SYRPSSSSSFASTVM--------------TSSLEDDSLNLRQQKLEKQRALLE-----QKQRRKR 61

  Fly   915 REMLYIDEETQSPTPTPSSSSMKRTPTVVSIAPALPDSITRSCSVGYLDSVAITPSDEALSALRK 979
            :|:|.:.   .:|...|..|..:|:.   ..||.:..:|:.:..: .||.:     |...:.|..
Zfish    62 QELLMVQ---PNPDGRPRRSRPRRSE---EQAPLVETNISTASDI-ILDGI-----DGPAALLGS 114

  Fly   980 DAPN--KRLILVDKKRNRRK------RQQQEDARRHK-----------LQQTGKSKSLDSCDLLS 1025
            :||:  .::.::...:..::      .:.:.||....           ||:.|.|.|::      
Zfish   115 EAPDLGSKIQVLSVSQTPQQPSPPVTEEPETDADTDTLLEPKTDIHTLLQRRGLSGSMN------ 173

  Fly  1026 LQTKLSSKEHEQVVRKLQEISDSSACSSAANTLCFKCRNNMSPSSACKRCQPSASSVLDEITAVV 1090
             ..:.|..|.|....:.:|.|.|                 :||::...|  |:::|.....|..:
Zfish   174 -YDEASEDEDEDDEYEAEERSRS-----------------LSPNTESTR--PASASSTKSTTECI 218

  Fly  1091 PAVEPAKESPAVQA--------KPAPKKRFDVITSFTDSPLFTRKHRFGIGRSKETAGTENS--- 1144
            |...|:.|..:::.        :|||:.             .|.|.|.    |::..|.:..   
Zfish   219 PVGSPSAEGSSIEVDNLEEFVLRPAPQG-------------VTVKCRI----SRDKKGMDRGLYP 266

  Fly  1145 TPLLGRKQDNGFSFVKQLSEVRWRRKEQPAQAQVNGSSNASTLERQPQPEITGAACGTVEATPVE 1209
            |..:..::::|    |::..:..|::::...:....|.:|:.|.|:.:..|     |.:.:..:.
Zfish   267 TYFMHLEREDG----KKVFLLAGRKRKKSKTSNYLISVDATDLSREGESFI-----GKLRSNLMG 322

  Fly  1210 AKASVSLHTQALTTLENIISRLRDLDEGRLTPPSTPQRLPRSSPASPAA--SKKNKRQQSNSPIR 1272
            .|.:|                   .|.|  |.||          .:|.|  .:.|.||:. :.|.
Zfish   323 TKFTV-------------------YDNG--TNPS----------KNPGALLEETNTRQEL-AAIC 355

  Fly  1273 HILNSPLLNRRQRKKQSIIESSDDEGNQTNGSGEESNNAGNGKQYRDLETFQKAQLRQKLKRGKI 1337
            :..|  :|..:..:|.::|...      .|.|.|........:|...|..:|...|...::    
Zfish   356 YETN--VLGFKGPRKMTVIIPG------MNMSFERVPVRPASEQESLLSKWQNHSLENLIE---- 408

  Fly  1338 EPNGSASCANPAPVRREFVMHNKAPMWNEMSQVYQLDFGGRVTQESAKNFQIEFRGKQ---VMQF 1399
                               :|||||:||:.:|.|.|:|.|||||.|.|||||......   ||||
Zfish   409 -------------------LHNKAPVWNDDTQSYVLNFHGRVTQASVKNFQIVHDNDPDYIVMQF 454

  Fly  1400 GRIDGNAYTLDFQYPFSALQAFAVALANVTQRL 1432
            ||:..:.:|||:.||..||||||:.|::...:|
Zfish   455 GRVAEDIFTLDYNYPMCALQAFAIGLSSFDSKL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 51..>295 CDD:225201
WD40 81..359 CDD:295369
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <588..>644 CDD:279506
Tub <1355..1426 CDD:279506 39/73 (53%)
tulp3XP_005164515.1 Tub_N 48..223 CDD:292938 38/217 (18%)
Tub 242..483 CDD:279506 82/329 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1445357at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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