DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and ifta-1

DIOPT Version :9

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_508940.4 Gene:ifta-1 / 183817 WormBaseID:WBGene00016935 Length:1246 Species:Caenorhabditis elegans


Alignment Length:629 Identity:144/629 - (22%)
Similarity:232/629 - (36%) Gaps:170/629 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LHFERNINTKCDCTI--LSLSWMGKVPDDIPEDEGWKLNRTNYYQEGWLATGNVRG---IVGVTF 62
            |:...|.|.|   ||  |::|...|....:||.........| |...::|.|...|   :|.:..
 Worm     5 LNVMANYNEK---TIGKLTMSVFRKFNLGLPEHGQLHFAEWN-YNSNYIACGGALGKLKVVKIGT 65

  Fly    63 TTSHCRKNMD-YPLRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVWIKYEGRWSIELIND 126
            ..:...|:.: ..|..|..|.||.:.|:...|||..|||.:.|:||:|.||..:..:|..|:||:
 Worm    66 DATDLNKSPNAATLVVNQALEGHNATVMNATWNENNQKLTTSDTSGLIIVWGMFNEQWCEEMINN 130

  Fly   127 RN-TPVTHFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLNLESTITCGIWTPDDQQVYFGTT 190
            || :.|....|:.:|....|.|.||.|:||::.|.|.|:.  .||..:....|.||...:.|||.
 Worm   131 RNKSVVVSICWNLEGTKIAIAYADGNVIVGTLEGNRIWNK--ELEIQLAACEWAPDGDMLIFGTA 193

  Fly   191 QGQVIVMDVHGAMVSQVQLSNDVPITSMA-----------------------WS---CEKFKMEE 229
            .|:|.|.|..|:...      |:|:..:.                       ||   ..|..::|
 Worm   194 DGKVSVFDDSGSHFL------DIPMHCLEAEDLEQALAKKEHQKEEIVCLKYWSPTLKSKTILDE 252

  Fly   230 GE-------EAEPGVTNAA------------------------------KRSFVLAVSFQNGYIY 257
            .|       |.:..||..|                              :..||  |::..|.:.
 Worm   253 MERDFERKLEKDREVTGTAIFTNFPTKPPPKELPEHEKNTEPYQPVPPDRPRFV--VAYARGMMQ 315

  Fly   258 LLKSFDDVSPAHI---NTCLNGALGMVMEWSNSRELLAVAGTLRTGVDGTKTEDMGTP----SCY 315
            |::|.:|..|..:   |..:.||     :||.:...|||.|.     |..|.|...:.    |.|
 Worm   316 LMRSLNDPEPVVVSIPNFKITGA-----KWSPNGAFLAVCGN-----DSDKDEPTFSKIHFLSAY 370

  Fly   316 TNLVKFYTETGTCLYQAHIPCSSATVSAITWGHNDKRLFIATGTQVHIAWVSRRVASLQLLCRLE 380
            .::|.::....:|            ::.|.|.        :||.::.||     .|...|:.::.
 Worm   371 GHIVGYFQTNDSC------------ITGICWE--------STGLRMAIA-----AAGTLLIGQIR 410

  Fly   381 IQASVGS--ESLLPLLPLPSRIKSLIGNLFAQTIRCCVPDLKSLRDFVSRPPLCSTRLHCTMIRH 443
            .:...||  |:::.:.......:  .|.:|..    ...|.|:::.......:...|.||.:|..
 Worm   411 PEFKWGSIEETIVYVYQKEELYQ--YGIMFYD----YKTDEKTVKTVTHFENMAFYREHCVLINR 469

  Fly   444 DDDSNL---------SSGTCYTLYLEYLGGLVPLLKGKRTSKIRPEFV----IFDPQVNDSPLYF 495
            .||..:         |.||.    |:|           ..:.:||:|.    |.....::...:.
 Worm   470 QDDGVIPHYFCQLCNSIGTS----LDY-----------NVTTVRPKFACVNGICAVIASEDRYFI 519

  Fly   496 QYSAEAKSSSGSSQSTTTGNSGRTDSSDSDFEERSR---FGSPR 536
            .:....|.:|..:.....|.||     |...||:.|   :|:.|
 Worm   520 WHFVLPKFNSVQAGIHVPGKSG-----DYVLEEQQRTIEYGTKR 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 51..>295 CDD:225201 81/314 (26%)
WD40 81..359 CDD:295369 86/348 (25%)
WD40 repeat 91..126 CDD:293791 15/34 (44%)
WD40 repeat 132..168 CDD:293791 12/35 (34%)
WD40 repeat 173..208 CDD:293791 11/34 (32%)
WD40 repeat 216..263 CDD:293791 15/109 (14%)
WD40 repeat 270..333 CDD:293791 16/69 (23%)
Tub <588..>644 CDD:279506
Tub <1355..1426 CDD:279506
ifta-1NP_508940.4 WD40 <31..210 CDD:225201 59/187 (32%)
WD40 repeat 38..87 CDD:293791 10/49 (20%)
WD40 repeat 92..129 CDD:293791 15/36 (42%)
WD40 repeat 137..173 CDD:293791 12/37 (32%)
WD40 repeat 176..219 CDD:293791 13/48 (27%)
ANAPC4_WD40 <334..392 CDD:372368 17/87 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2041
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D91334at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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